(Q33718484)

28 July 2017

1 reference

title

Dynamic probe selection for studying microbial transcriptome with high-density genomic tiling microarrays (English)

1 reference

28 July 2017

0 references

Hedda Høvik

1

1 reference

PubMed ID

20144223

28 July 2017

Tsute Chen

series ordinal

2

1 reference

28 July 2017

9 February 2010

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28 July 2017

1 reference

28 July 2017

11

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28 July 2017

82

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Creative Commons Attribution 2.0 Generic

28 July 2017

start time

9 February 2010

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2105-11-82

0 references

cites work

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Whole-genome expression profiling of the marine diatom Thalassiosira pseudonana identifies genes involved in silicon bioprocesses

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Improvement of oligonucleotide probe design criteria for functional gene microarrays in environmental applications

21 June 2018

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Design optimization methods for genomic DNA tiling arrays

21 June 2018

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Effects of DNA secondary structure on oligonucleotide probe binding efficiency

21 June 2018

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Selection of optimal oligonucleotide probes for microarrays using multiple criteria, global alignment and parameter estimation.

21 June 2018

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Empirical establishment of oligonucleotide probe design criteria

21 June 2018

1 reference

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21 June 2018

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Micros for microbes: non-coding regulatory RNAs in bacteria

21 June 2018

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Secondary structure in the target as a confounding factor in synthetic oligomer microarray design

21 June 2018

1 reference

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Global identification of human transcribed sequences with genome tiling arrays

21 June 2018

1 reference

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Osprey: a comprehensive tool employing novel methods for the design of oligonucleotides for DNA sequencing and microarrays.

21 June 2018

1 reference

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Detection of genes involved in biodegradation and biotransformation in microbial communities by using 50-mer oligonucleotide microarrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836303

Empirical analysis of transcriptional activity in the Arabidopsis genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836303

Modeling of DNA microarray data by using physical properties of hybridization

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836303

OligoArray 2.0: design of oligonucleotide probes for DNA microarrays using a thermodynamic approach

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836303

Prioritized selection of oligodeoxyribonucleotide probes for efficient hybridization to RNA transcripts

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836303

The importance of thermodynamic equilibrium for high throughput gene expression arrays.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836303

Transcriptome analysis of Escherichia coli using high-density oligonucleotide probe arrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836303

Large-scale transcriptional activity in chromosomes 21 and 22

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836303

RNA expression analysis using a 30 base pair resolution Escherichia coli genome array

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836303

Assessment of the sensitivity and specificity of oligonucleotide (50mer) microarrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836303

Maskless fabrication of light-directed oligonucleotide microarrays using a digital micromirror array

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836303

Basic local alignment search tool

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836303

Probe selection for DNA microarrays using OligoWiz.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836303

Optimization of probe coverage for high-resolution oligonucleotide aCGH.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836303

Transcript mapping with high-density oligonucleotide tiling arrays.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836303

GoArrays: highly dynamic and efficient microarray probe design.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836303

Comparison of different melting temperature calculation methods for short DNA sequences.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836303

Evaluation of 50-mer oligonucleotide arrays for detecting microbial populations in environmental samples.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836303

Effect of secondary structure on single nucleotide polymorphism detection with a porous microarray matrix; implications for probe selection

30 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20144223

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-11-82

1 reference

28 July 2017

journals/bmcbi/HovikC10

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

28 July 2017

1 reference

PubMed ID

20144223