(Q33719948)

28 July 2017

title

Genome-wide characterization of simple sequence repeats in cucumber (Cucumis sativus L.). (English)

1 reference

28 July 2017

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Philipp W Simon

4

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ORCID Public Data File 2021

Sanwen Huang

7

object named as

Sanwen Huang

1 reference

28 July 2017

6

Chinnappa D Kodira

1 reference

28 July 2017

Pablo F Cavagnaro

1

1 reference

28 July 2017

Douglas A Senalik

2

1 reference

28 July 2017

Luming Yang

3

1 reference

28 July 2017

Timothy T Harkins

5

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28 July 2017

Yiqun Weng

8

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28 July 2017

language of work or name

English

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publication date

15 October 2010

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28 July 2017

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28 July 2017

volume

11

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28 July 2017

page(s)

569

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https://scigraph.springernature.com/pub.10.1186/1471-2164-11-569

28 July 2017

exact match

0 references

cites work

Cucumber (Cucumis sativus) and melon (C. melo) have numerous wild relatives in Asia and Australia, and the sister species of melon is from Australia

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Transcriptome sequencing and comparative analysis of cucumber flowers with different sex types

21 June 2018

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The genome of the cucumber, Cucumis sativus L

21 June 2018

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Centromere repositioning in cucurbit species: implication of the genomic impact from centromere activation and inactivation.

21 June 2018

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An integrated genetic and cytogenetic map of the cucumber genome

21 June 2018

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Molecular isolation of the M gene suggests that a conserved-residue conversion induces the formation of bisexual flowers in cucumber plants.

21 June 2018

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21 June 2018

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Next is now: new technologies for sequencing of genomes, transcriptomes, and beyond

21 June 2018

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The nuclear genome of Brachypodium distachyon: analysis of BAC end sequences

21 June 2018

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The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla

21 June 2018

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Detecting microsatellites within genomes: significant variation among algorithms

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Phylogenetics of Cucumis (Cucurbitaceae): cucumber (C. sativus) belongs in an Asian/Australian clade far from melon (C. melo)

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

21 June 2018

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Distribution of microsatellites in the genome of Medicago truncatula: a resource of genetic markers that integrate genetic and physical maps

21 June 2018

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The map-based sequence of the rice genome

21 June 2018

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Characterization of EST-derived microsatellites in the wheat genome and development of eSSR markers

21 June 2018

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Genic microsatellite markers in plants: features and applications

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Genome evolution in the genus Sorghum (Poaceae)

21 June 2018

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Genome-wide analysis of microsatellite repeats in humans: their abundance and density in specific genomic regions

21 June 2018

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Microsatellites: genomic distribution, putative functions and mutational mechanisms: a review

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Computational and experimental analysis of microsatellites in rice (Oryza sativa L.): frequency, length variation, transposon associations, and genetic marker potential

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Towards an expanded and integrated linkage map of cucumber (Cucumis sativus L.).

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

The TIGR Gene Indices: analysis of gene transcript sequences in highly sampled eukaryotic species

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Computational and experimental characterization of physically clustered simple sequence repeats in plants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Microsatellites in different eukaryotic genomes: survey and analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Simple sequence repeats in Escherichia coli: abundance, distribution, composition, and polymorphism

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Primer3 on the WWW for general users and for biologist programmers

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Clustered microsatellite mutations in the pipefish Syngnathus typhle.

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

High mutation rate of a long microsatellite allele in Drosophila melanogaster provides evidence for allele-specific mutation rates

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Equilibrium distributions of microsatellite repeat length resulting from a balance between slippage events and point mutations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Microsatellite polymorphism in natural populations of the wild plant Arabidopsis thaliana

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Microsatellite evolution--a reciprocal study of repeat lengths at homologous loci in cattle and sheep.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Microsatellite DNA variation and the evolution, domestication and phylogeography of taurine and zebu cattle (Bos taurus and Bos indicus)

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Microsatellite instability in yeast: dependence on the length of the microsatellite

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

The parentage of a classic wine grape, Cabernet Sauvignon

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Simple sequence repeats as a source of quantitative genetic variation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Genetic control of microsatellite stability

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

PCR-amplified microsatellites as markers in plant genetics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Instability of short tandem repeats (microsatellites) in human cancers.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Trinucleotide repeat expansions and human genetic disease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Rapid isolation of high molecular weight plant DNA

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Hypervariabflity of simple sequences as a general source for polymorphic DNA markers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Slippage synthesis of simple sequence DNA

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Cross-species transferability of microsatellite markers from six aphid (Hemiptera: Aphididae) species and their use for evaluating biotypic diversity in two cereal aphids.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Microsatellite markers associated with two Aegilops tauschii-derived greenbug resistance loci in wheat.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

The GA octodinucleotide repeat binding factor BBR participates in the transcriptional regulation of the homeobox gene Bkn3.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Development and mapping of 2240 new SSR markers for rice (Oryza sativa L.).

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.).

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Microsatellites are preferentially associated with nonrepetitive DNA in plant genomes

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Conservation and dynamics of microsatellite loci over 300 million years of marine turtle evolution

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Microsatellite allele frequencies in humans and chimpanzees, with implications for constraints on allele size

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Microsatellite 'evolution': directionality or bias?

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091718

Heterogeneous mutation processes in human microsatellite DNA sequences

30 October 2018

1 reference

12 December 2020

A genetic map of cucumber composed of RAPDs, RFLPs, AFLPs, and loci conditioning resistance to papaya ringspot and zucchini yellow mosaic viruses

1 reference

12 December 2020

Inheritance and linkage relationships of isozyme and morphological loci in cucumber (Cucumis sativus L.).

1 reference

12 December 2020

DNA triplet repeats mediate heterochromatin-protein-1-sensitive variegated gene silencing

1 reference

12 December 2020

A high-density microsatellite consensus map for bread wheat (Triticum aestivum L.).

1 reference

12 December 2020

Genetic diversity in Cucumis sativus L. assessed by variation at 18 allozyme coding loci

1 reference

12 December 2020

Linkages among RFLP, RAPD, isozyme, disease-resistance, and morphological markers in narrow and wide crosses of cucumber

1 reference

12 December 2020

Informativeness of human (dC-dA)n.(dG-dT)n polymorphisms

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-11-569

1 reference

Dimensions Publication ID

28 July 2017

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-11-569

9 September 2019

1 reference

28 July 2017

1 reference