(Q33757972)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575119%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

title

Nucleolus association of chromosomal domains is largely maintained in cellular senescence despite massive nuclear reorganisation (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575119%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575119%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

Attila Németh

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575119%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

author name string

Stefan Dillinger

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575119%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

language of work or name

English

0 references

publication date

2 June 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575119%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575119%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

volume

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575119%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

issue

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575119%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

page(s)

e0178821

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575119%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

21 March 2020

copyright license

start time

2 June 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC5456395/fullTextXML

inferred from PubMed Central ID database lookup

cites work

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Chromatin Domains: The Unit of Chromosome Organization

28 July 2018

1 reference

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Reorganization of chromosome architecture in replicative cellular senescence

28 July 2018

1 reference

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The 3D Genome as Moderator of Chromosomal Communication

28 July 2018

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More than 10% of yeast genes are related to genome stability and influence cellular senescence via rDNA maintenance

28 July 2018

1 reference

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The redundancy of the mammalian heterochromatic compartment

28 July 2018

1 reference

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Genome-wide maps of nuclear lamina interactions in single human cells

28 July 2018

1 reference

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Getting the genome in shape: the formation of loops, domains and compartments

28 July 2018

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Grabbing the genome by the NADs

28 July 2018

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The 4D nucleome: Evidence for a dynamic nuclear landscape based on co-aligned active and inactive nuclear compartments

28 July 2018

1 reference

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Principles of chromatin organization in yeast: relevance of polymer models to describe nuclear organization and dynamics

28 July 2018

1 reference

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Aging stem cells. A Werner syndrome stem cell model unveils heterochromatin alterations as a driver of human aging

28 July 2018

1 reference

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The lncRNA Firre anchors the inactive X chromosome to the nucleolus by binding CTCF and maintains H3K27me3 methylation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

The role of chromosome domains in shaping the functional genome.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Three-dimensional genome architecture: players and mechanisms

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Integrative analysis of 111 reference human epigenomes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Global reorganization of the nuclear landscape in senescent cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Topologically associating domains are stable units of replication-timing regulation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

A separable domain of the p150 subunit of human chromatin assembly factor-1 promotes protein and chromosome associations with nucleoli

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

A genomics approach identifies senescence-specific gene expression regulation.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Chromatin maintenance and dynamics in senescence: a spotlight on SAHF formation and the epigenome of senescent cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

The role of senescent cells in ageing

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Stochastic genome-nuclear lamina interactions: modulating roles of Lamin A and BAF.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Nucleolus and nuclear periphery: velcro for heterochromatin.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Large-scale chromatin organization: the good, the surprising, and the still perplexing

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Recollections of a scientific journey published in human genetics: from chromosome territories to interphase cytogenetics and comparative genome hybridization

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Higher-order unfolding of satellite heterochromatin is a consistent and early event in cell senescence

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Senescent cells harbour features of the cancer epigenome.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

The shared genomic architecture of human nucleolar organizer regions.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Redistribution of the Lamin B1 genomic binding profile affects rearrangement of heterochromatic domains and SAHF formation during senescence

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Lamin B1 depletion in senescent cells triggers large-scale changes in gene expression and the chromatin landscape

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

The spatial organization of the human genome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

The chromatin remodelling complex NoRC safeguards genome stability by heterochromatin formation at telomeres and centromeres

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

28 July 2018

The hallmarks of aging

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Single-cell dynamics of genome-nuclear lamina interactions

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Genome architecture: domain organization of interphase chromosomes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Genomes of replicatively senescent cells undergo global epigenetic changes leading to gene silencing and activation of transposable elements

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Independence of repressive histone marks and chromatin compaction during senescent heterochromatic layer formation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Topological domains in mammalian genomes identified by analysis of chromatin interactions

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Nucleolar association and transcriptional inhibition through 5S rDNA in mammals

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Lessons from senescence: Chromatin maintenance in non-proliferating cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Tracking epigenetic histone modifications in single cells using Fab-based live endogenous modification labeling

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Genome organization in and around the nucleolus

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Senescence-associated heterochromatin foci are dispensable for cellular senescence, occur in a cell type- and insult-dependent manner and follow expression of p16(ink4a).

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Chromatin structure as a mediator of aging

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

High-resolution whole-genome sequencing reveals that specific chromatin domains from most human chromosomes associate with nucleoli

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Genome organization and function: a view from yeast and Arabidopsis.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Initial genomics of the human nucleolus

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

28 July 2018

Chromosome territories

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

The NoRC complex mediates the heterochromatin formation and stability of silent rRNA genes and centromeric repeats

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Comprehensive mapping of long-range interactions reveals folding principles of the human genome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Centromere RNA is a key component for the assembly of nucleoproteins at the nucleolus and centromere

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Perinucleolar targeting of the inactive X during S phase: evidence for a role in the maintenance of silencing.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Alterations to nuclear architecture and genome behavior in senescent cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

H3K9 methylation and RNA interference regulate nucleolar organization and repeated DNA stability

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

X-inactivation profile reveals extensive variability in X-linked gene expression in females

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

UBF-binding site arrays form pseudo-NORs and sequester the RNA polymerase I transcription machinery.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Rb-mediated heterochromatin formation and silencing of E2F target genes during cellular senescence

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Chromosome territories, nuclear architecture and gene regulation in mammalian cells

28 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0178821

The multifunctional nucleolus

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0178821

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0178821

CTCF tethers an insulator to subnuclear sites, suggesting shared insulator mechanisms across species

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0178821

Remodeling of nuclear architecture by the thiodioxoxpiperazine metabolite chaetocin

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0178821

Epigenetic regulation of ageing: linking environmental inputs to genomic stability

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0178821

Active human nucleolar organizer regions are interspersed with inactive rDNA repeats in normal and tumor cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0178821

Nucleolar repression facilitates initiation and maintenance of senescence

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0178821

Human acrocentric chromosomes with transcriptionally silent nucleolar organizer regions associate with nucleoli

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0178821

21 January 2018

Nucleolar nomenclature.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5456395

Chromatin Organization and the Mammalian Nucleolus

30 October 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0178821

Re-modelling of nuclear architecture in quiescent and senescent human fibroblasts

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28575119

12 December 2020

inferred from PubMed ID database lookup

A new role of the rDNA and nucleolus in the nucleus--rDNA instability maintains genome integrity

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28575119

12 December 2020

inferred from PubMed ID database lookup

Perturbation of ribosome biogenesis drives cells into senescence through 5S RNP-mediated p53 activation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28575119

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1371/JOURNAL.PONE.0178821

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575119%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575119%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

PubMed publication ID

28575119

1 reference