(Q34466522)

2 August 2017

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title

Three-dimensional genome architecture: players and mechanisms (English)

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Erratum: Three-dimensional genome architecture: players and mechanisms

2 August 2017

corrigendum / erratum

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12 July 2019

http://api.crossref.org/works?select=update-to&filter=doi:10.1038/NRM4042

Ana Pombo

1

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author name string

Niall Dillon

series ordinal

2

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2 August 2017

language of work or name

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11 March 2015

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Nature Reviews Molecular Cell Biology

2 August 2017

published in

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2 August 2017

volume

16

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2 August 2017

issue

4

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2 August 2017

page(s)

245-257

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Transcription complex stability and chromatin dynamics in vivo.

2 August 2017

cites work

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The effect of distance on long-range chromatin interactions

21 January 2018

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Capturing chromosome conformation

21 January 2018

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Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C).

21 January 2018

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Maintenance of genomic integrity in hematopoietic stem cells

21 January 2018

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21 January 2018

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21 January 2018

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Analysis of hundreds of cis-regulatory landscapes at high resolution in a single, high-throughput experiment.

21 January 2018

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Comprehensive mapping of long-range interactions reveals folding principles of the human genome

21 January 2018

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Genome architectures revealed by tethered chromosome conformation capture and population-based modeling

21 January 2018

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Targeted Chromatin Capture (T2C): a novel high resolution high throughput method to detect genomic interactions and regulatory elements

21 January 2018

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Looping and interaction between hypersensitive sites in the active beta-globin locus

21 January 2018

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Long-range chromosomal interactions regulate the timing of the transition between poised and active gene expression

21 January 2018

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Dynamic long-range chromatin interactions control Myb proto-oncogene transcription during erythroid development

21 January 2018

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Exchange of GATA factors mediates transitions in looped chromatin organization at a developmentally regulated gene locus

21 January 2018

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An insulator element 3' to the CFTR gene binds CTCF and reveals an active chromatin hub in primary cells

21 January 2018

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CD8 locus nuclear dynamics during thymocyte development

21 January 2018

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The beta-globin nuclear compartment in development and erythroid differentiation

21 January 2018

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Ldb1 complexes: the new master regulators of erythroid gene transcription

21 January 2018

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Controlling long-range genomic interactions at a native locus by targeted tethering of a looping factor

21 January 2018

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An atlas of active enhancers across human cell types and tissues

21 January 2018

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Position-independent, high-level expression of the human beta-globin gene in transgenic mice

21 January 2018

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Analysis of mice with single and multiple copies of transgenes reveals a novel arrangement for the lambda5-VpreB1 locus control region

21 January 2018

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Cohesin: its roles and mechanisms

21 January 2018

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Cohesins functionally associate with CTCF on mammalian chromosome arms

21 January 2018

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A role for cohesin in T-cell-receptor rearrangement and thymocyte differentiation

21 January 2018

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CTCF: an architectural protein bridging genome topology and function

21 January 2018

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The long-range interaction landscape of gene promoters

21 January 2018

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Regulatory elements required for the activation and repression of the protocadherin-alpha gene cluster

21 January 2018

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CTCF/cohesin-mediated DNA looping is required for protocadherin α promoter choice

21 January 2018

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Topological domains in mammalian genomes identified by analysis of chromatin interactions

21 January 2018

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Spatial partitioning of the regulatory landscape of the X-inactivation centre

21 January 2018

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Gene density, transcription, and insulators contribute to the partition of the Drosophila genome into physical domains

21 January 2018

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Three-dimensional folding and functional organization principles of the Drosophila genome

21 January 2018

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Insulator function and topological domain border strength scale with architectural protein occupancy

21 January 2018

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Conserved, developmentally regulated mechanism couples chromosomal looping and heterochromatin barrier activity at the homeobox gene A locus

21 January 2018

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Cohesin-based chromatin interactions enable regulated gene expression within preexisting architectural compartments

21 January 2018

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Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells

21 January 2018

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Cohesin-mediated interactions organize chromosomal domain architecture

21 January 2018

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Understanding the roles of nuclear A- and B-type lamins in brain development

21 January 2018

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Disturbed nuclear orientation and cellular migration in A-type lamin deficient cells

21 January 2018

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Mechanisms and dynamics of nuclear lamina-genome interactions

21 January 2018

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Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions

21 January 2018

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Constitutive nuclear lamina-genome interactions are highly conserved and associated with A/T-rich sequence

21 January 2018

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Recruitment to the nuclear periphery can alter expression of genes in human cells

21 January 2018

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Single-cell dynamics of genome-nuclear lamina interactions

21 January 2018

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Nucleolus and nuclear periphery: velcro for heterochromatin.

21 January 2018

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High-resolution whole-genome sequencing reveals that specific chromatin domains from most human chromosomes associate with nucleoli

21 January 2018

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Initial genomics of the human nucleolus

21 January 2018

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Tissue-specific spatial organization of genomes

21 January 2018

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Evolutionary conservation of chromosome territory arrangements in cell nuclei from higher primates.

21 January 2018

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Chromobility: the rapid movement of chromosomes in interphase nuclei.

21 January 2018

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Poised transcription factories prime silent uPA gene prior to activation.

21 January 2018

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Disease-specific gene repositioning in breast cancer

21 January 2018

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Chromosome territories--a functional nuclear landscape.

21 January 2018

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Intermingling of chromosome territories in interphase suggests role in translocations and transcription-dependent associations

21 January 2018

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Spatial organization of the mouse genome and its role in recurrent chromosomal translocations

21 January 2018

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Spatial dynamics of chromosome translocations in living cells.

21 January 2018

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Replicon clusters are stable units of chromosome structure: evidence that nuclear organization contributes to the efficient activation and propagation of S phase in human cells

21 January 2018

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Spatial and temporal dynamics of DNA replication sites in mammalian cells

21 January 2018

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Mitotic repression of the transcriptional machinery.

21 January 2018

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Mitotic chromosome structure and condensation

21 January 2018

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Organization of the mitotic chromosome

21 January 2018

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Variant histone H3.3 marks promoters of transcriptionally active genes during mammalian cell division

21 January 2018

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Histone modifications defining active genes persist after transcriptional and mitotic inactivation

21 January 2018

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H2A.Z Maintenance during Mitosis Reveals Nucleosome Shifting on Mitotically Silenced Genes

21 January 2018

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Bookmarking by specific and nonspecific binding of FoxA1 pioneer factor to mitotic chromosomes

21 January 2018

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Tissue-specific mitotic bookmarking by hematopoietic transcription factor GATA1.

21 January 2018

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Mitotic retention of gene expression patterns by the cell fate-determining transcription factor Runx2.

21 January 2018

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A reconfigured pattern of MLL occupancy within mitotic chromatin promotes rapid transcriptional reactivation following mitotic exit.

21 January 2018

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Gene bookmarking accelerates the kinetics of post-mitotic transcriptional re-activation

21 January 2018

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Chromatin condensation via the condensin II complex is required for peripheral T-cell quiescence

21 January 2018

1 reference

An H3K9/S10 methyl-phospho switch modulates Polycomb and Pol II binding at repressed genes during differentiation

21 January 2018

1 reference

The aurora B kinase and the polycomb protein ring1B combine to regulate active promoters in quiescent lymphocytes

21 January 2018

1 reference

A novel role for the Aurora B kinase in epigenetic marking of silent chromatin in differentiated postmitotic cells.

21 January 2018

1 reference

Regulation of HP1-chromatin binding by histone H3 methylation and phosphorylation

21 January 2018

1 reference

LBR and lamin A/C sequentially tether peripheral heterochromatin and inversely regulate differentiation.

21 January 2018

1 reference

Nuclear architecture of rod photoreceptor cells adapts to vision in mammalian evolution.

21 January 2018

1 reference

Glutamine-expanded ataxin-7 alters TFTC/STAGA recruitment and chromatin structure leading to photoreceptor dysfunction.

21 January 2018

1 reference

Lessons from senescence: Chromatin maintenance in non-proliferating cells

21 January 2018

1 reference

Molecular dissection of formation of senescence-associated heterochromatin foci

21 January 2018

1 reference

Downregulation of Wnt signaling is a trigger for formation of facultative heterochromatin and onset of cell senescence in primary human cells

21 January 2018

1 reference

Lamin B1 loss is a senescence-associated biomarker.

21 January 2018

1 reference

The role of nuclear lamin B1 in cell proliferation and senescence.

21 January 2018

1 reference

Lamin B1 depletion in senescent cells triggers large-scale changes in gene expression and the chromatin landscape

21 January 2018

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Redistribution of the Lamin B1 genomic binding profile affects rearrangement of heterochromatic domains and SAHF formation during senescence

21 January 2018

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Nuclear mechanics during cell migration.

21 January 2018

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Hematopoietic stem cell quiescence promotes error-prone DNA repair and mutagenesis

21 January 2018

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Chromosomal variation in neurons of the developing and adult mammalian nervous system

21 January 2018

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The ploidy conveyor of mature hepatocytes as a source of genetic variation.

21 January 2018

1 reference

CRISPR-based technologies: prokaryotic defense weapons repurposed

21 January 2018

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Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data

21 January 2018

1 reference

Discovering genome regulation with 3C and 3C-related technologies

21 January 2018

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A decade of 3C technologies: insights into nuclear organization

21 January 2018

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Robust 4C-seq data analysis to screen for regulatory DNA interactions.

21 January 2018

1 reference

Large-scale chromatin organization: the good, the surprising, and the still perplexing

21 January 2018

1 reference

Disclosure of a structural milieu for the proximity ligation reveals the elusive nature of an active chromatin hub.

21 January 2018

1 reference

The statistical-mechanics of chromosome conformation capture

21 January 2018

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Models of chromosome structure

21 January 2018

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Complexity of chromatin folding is captured by the strings and binders switch model

21 January 2018

1 reference

The three-dimensional folding of the α-globin gene domain reveals formation of chromatin globules

21 January 2018

1 reference

Single-cell Hi-C reveals cell-to-cell variability in chromosome structure

21 January 2018

1 reference

21 January 2018

Replication factories

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Measurement of replication structures at the nanometer scale using super-resolution light microscopy

21 January 2018

1 reference

Numbers and organization of RNA polymerases, nascent transcripts, and transcription units in HeLa nuclei.

21 January 2018

1 reference

Transcription factories: quantitative studies of nanostructures in the mammalian nucleus

21 January 2018

1 reference

Quantitation of RNA polymerase II and its transcription factors in an HeLa cell: little soluble holoenzyme but significant amounts of polymerases attached to the nuclear substructure

21 January 2018

1 reference

Regional specialization in human nuclei: visualization of discrete sites of transcription by RNA polymerase III.

21 January 2018

1 reference

A conserved organization of transcription during embryonic stem cell differentiation and in cells with high C value

21 January 2018

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Active genes dynamically colocalize to shared sites of ongoing transcription

21 January 2018

1 reference

Preferential associations between co-regulated genes reveal a transcriptional interactome in erythroid cells

21 January 2018

1 reference

Polycomb associates genome-wide with a specific RNA polymerase II variant, and regulates metabolic genes in ESCs

21 January 2018

1 reference

Polycomb response elements mediate the formation of chromosome higher-order structures in the bithorax complex.

21 January 2018

1 reference

RNAi components are required for nuclear clustering of Polycomb group response elements.

21 January 2018

1 reference

A novel 6C assay uncovers Polycomb-mediated higher order chromatin conformations

21 January 2018

1 reference

Changes in chromosome organization during PHA-activation of resting human lymphocytes measured by cryo-FISH

21 January 2018

1 reference

Global identification of yeast chromosome interactions using Genome conformation capture

21 January 2018

1 reference

Transcriptional regulation and spatial organisation of the human AML1/RUNX1 gene

31 March 2020

1 reference

Th2-specific chromatin remodeling and enhancer activity in the Th2 cytokine locus control region

31 March 2020

1 reference

Synthetic human beta-globin 5'HS2 constructs function as locus control regions only in multicopy transgene concatamers.

31 March 2020

1 reference

Cohesins form chromosomal cis-interactions at the developmentally regulated IFNG locus

31 March 2020

1 reference

Mapping of INS promoter interactions reveals its role in long-range regulation of SYT8 transcription

31 March 2020

1 reference

Transcription factor dosage affects changes in higher order chromatin structure associated with activation of a heterochromatic gene

31 March 2020

1 reference

Subchromosomal Positioning of the Epidermal Differentiation Complex (EDC) in Keratinocyte and Lymphoblast Interphase Nuclei

31 March 2020

1 reference

DNA damage defines sites of recurrent chromosomal translocations in B lymphocytes

31 March 2020

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Features of nuclear architecture that influence gene expression in higher eukaryotes: confronting the enigma of epigenetics

31 March 2020

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12 December 2020

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12 December 2020

Specialized transcription factories within mammalian nuclei.

1 reference

12 December 2020

A novel sequence-specific DNA binding protein which interacts with three regularly spaced direct repeats of the CCCTC-motif in the 5'-flanking sequence of the chicken c-myc gene

1 reference

12 December 2020

Large-scale chromatin organization of the major histocompatibility complex and other regions of human chromosome 6 and its response to interferon in interphase nuclei

1 reference

12 December 2020

Identifiers

DOI

10.1038/NRM3965

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Dimensions Publication ID

2 August 2017

1008605170

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