(Q33810500)

28429735

29 July 2017

title

Phylogenetic analysis of metastatic progression in breast cancer using somatic mutations and copy number aberrations (English)

1 reference

Erratum: Phylogenetic analysis of metastatic progression in breast cancer using somatic mutations and copy number aberrations

29 July 2017

1 reference

corrigendum / erratum

0 references

author

David Brown

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

Gabriele Zoppoli

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

19

Diether Lambrechts

1 reference

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7 June 2020

author name string

Dominiek Smeets

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

Borbála Székely

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

Denis Larsimont

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

A Marcell Szász

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

Pierre-Yves Adnet

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

Françoise Rothé

7

1 reference

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7 June 2020

Ghizlane Rouas

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

Zsófia I Nagy

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

Zsófia Faragó

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

Anna-Mária Tőkés

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

Magdolna Dank

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

Gyöngyvér Szentmártoni

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

Nóra Udvarhelyi

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

Lajos Pusztai

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

Martine Piccart

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

Janina Kulka

18

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

Christos Sotiriou

20

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

Christine Desmedt

21

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

language of work or name

English

0 references

publication date

20 April 2017

1 reference

28429735

29 July 2017

published in

Nature Communications

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

volume

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

page(s)

14944

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

Plasma ESR1 Mutations and the Treatment of Estrogen Receptor-Positive Advanced Breast Cancer.

7 June 2020

cites work

1 reference

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4 July 2018

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Heterogeneity and clinical significance of ESR1 mutations in ER-positive metastatic breast cancer patients receiving fulvestrant

4 July 2018

1 reference

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Early and multiple origins of metastatic lineages within primary tumors

4 July 2018

1 reference

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Analysis of ESR1 mutation in circulating tumor DNA demonstrates evolution during therapy for metastatic breast cancer.

4 July 2018

1 reference

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Multifocal clonal evolution characterized using circulating tumour DNA in a case of metastatic breast cancer

4 July 2018

1 reference

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Genomic Characterization of Brain Metastases Reveals Branched Evolution and Potential Therapeutic Targets

4 July 2018

1 reference

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Locoregional treatment versus no treatment of the primary tumour in metastatic breast cancer: an open-label randomised controlled trial

4 July 2018

1 reference

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Contralateral breast cancer can represent a metastatic spread of the first primary tumor: determination of clonal relationship between contralateral breast cancers using next-generation whole genome sequencing

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Subclonal diversification of primary breast cancer revealed by multiregion sequencing

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

The evolutionary history of lethal metastatic prostate cancer

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Tracking the origins and drivers of subclonal metastatic expansion in prostate cancer.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Spatial and temporal heterogeneity in high-grade serous ovarian cancer: a phylogenetic analysis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Convergent loss of PTEN leads to clinical resistance to a PI(3)Kα inhibitor

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Spatial and temporal diversity in genomic instability processes defines lung cancer evolution

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Phylogenetic quantification of intra-tumour heterogeneity

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

PyClone: statistical inference of clonal population structure in cancer.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Genomic architecture and evolution of clear cell renal cell carcinomas defined by multiregion sequencing

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

D538G mutation in estrogen receptor-α: A novel mechanism for acquired endocrine resistance in breast cancer

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

ESR1 ligand-binding domain mutations in hormone-resistant breast cancer

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Activating ESR1 mutations in hormone-resistant metastatic breast cancer

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Metastatic progression of breast cancer: insights from 50 years of autopsies.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Methods and challenges in timing chromosomal abnormalities within cancer samples

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Endocrine-therapy-resistant ESR1 variants revealed by genomic characterization of breast-cancer-derived xenografts

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Signatures of mutational processes in human cancer

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Distinct evolutionary trajectories of primary high-grade serous ovarian cancers revealed through spatial mutational profiling

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Copynumber: Efficient algorithms for single- and multi-track copy number segmentation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

An integrated map of genetic variation from 1,092 human genomes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Whole-genome analysis informs breast cancer response to aromatase inhibition

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Absolute quantification of somatic DNA alterations in human cancer

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

4 July 2018

1 reference

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Intratumor Heterogeneity and Branched Evolution Revealed by Multiregion Sequencing

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Tumour evolution inferred by single-cell sequencing

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

phangorn: phylogenetic analysis in R

4 July 2018

1 reference

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Distant metastasis occurs late during the genetic evolution of pancreatic cancer

4 July 2018

1 reference

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The patterns and dynamics of genomic instability in metastatic pancreatic cancer

4 July 2018

1 reference

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Dindel: accurate indel calls from short-read data

4 July 2018

1 reference

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Allele-specific copy number analysis of tumors

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Genome remodelling in a basal-like breast cancer metastasis and xenograft

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Stage IV breast cancer in the era of targeted therapy: does surgery of the primary tumor matter?

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Tumor self-seeding by circulating cancer cells

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Genome Alteration Print (GAP): a tool to visualize and mine complex cancer genomic profiles obtained by SNP arrays

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Mutational evolution in a lobular breast tumour profiled at single nucleotide resolution

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

The Sequence Alignment/Map format and SAMtools

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Fast and accurate short read alignment with Burrows-Wheeler transform

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Effect of primary tumor extirpation in breast cancer patients who present with stage IV disease and an intact primary tumor

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

APE: Analyses of Phylogenetics and Evolution in R language

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

dbSNP: the NCBI database of genetic variation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Exome sequencing of contralateral breast cancer identifies metastatic disease.

4 July 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS14944

Mutation tracking in circulating tumor DNA predicts relapse in early breast cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS14944

Reconstructing ancestral character states under Wagner parsimony

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS14944

Recommendations for human epidermal growth factor receptor 2 testing in breast cancer: American Society of Clinical Oncology/College of American Pathologists clinical practice guideline update

21 January 2018

2 references

https://api.crossref.org/works/10.1038%2FNCOMMS14944

21 January 2018

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474888

Presence of a growth-stimulating factor in serum following primary tumor removal in mice

30 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28429735

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NCOMMS14944

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

7 June 2020

ADS bibcode

2017NatCo...814944B

0 references

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28429735%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

28429735

1 reference