(Q33832637)

29 July 2017

title

Direct transactivator-transcription factor IID (TFIID) contacts drive yeast ribosomal protein gene transcription (English)

1 reference

29 July 2017

Justin H Layer

1

1 reference

29 July 2017

Scott G Miller

series ordinal

2

1 reference

29 July 2017

P Anthony Weil

series ordinal

3

1 reference

29 July 2017

language of work or name

English

0 references

publication date

26 February 2010

1 reference

Journal of Biological Chemistry

29 July 2017

published in

1 reference

29 July 2017

volume

285

1 reference

29 July 2017

issue

20

1 reference

29 July 2017

page(s)

15489-15499

1 reference

Cryo-EM reveals promoter DNA binding and conformational flexibility of the general transcription factor TFIID.

29 July 2017

cites work

1 reference

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Proteomics reveals a physical and functional link between hepatocyte nuclear factor 4alpha and transcription factor IID.

28 July 2018

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Mediator complex association with constitutively transcribed genes in yeast

28 July 2018

1 reference

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In-depth profiling of post-translational modifications on the related transcription factor complexes TFIID and SAGA.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Structures of three distinct activator-TFIID complexes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Sfp1 interaction with TORC1 and Mrs6 reveals feedback regulation on TOR signaling

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Mapping the initiator binding Taf2 subunit in the structure of hydrated yeast TFIID

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Global transcriptional repression in C. elegans germline precursors by regulated sequestration of TAF-4

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Multivalent binding of p53 to the STAGA complex mediates coactivator recruitment after UV damage

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Structural changes in TAF4b-TFIID correlate with promoter selectivity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Conserved region I of human coactivator TAF4 binds to a short hydrophobic motif present in transcriptional regulators

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Crystal structure, biochemical and genetic characterization of yeast and E. cuniculi TAF(II)5 N-terminal domain: implications for TFIID assembly

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Structural analysis and dimerization potential of the human TAF5 subunit of TFIID

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Yeast TFIID serves as a coactivator for Rap1p by direct protein-protein interaction

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Full and partial genome-wide assembly and disassembly of the yeast transcription machinery in response to heat shock

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

TAF4 nucleates a core subcomplex of TFIID and mediates activated transcription from a TATA-less promoter

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

The general transcription machinery and general cofactors

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Genome-wide location of the coactivator mediator: Binding without activation and transient Cdk8 interaction on DNA.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Genome-wide occupancy profile of mediator and the Srb8-11 module reveals interactions with coding regions

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Cryo-electron microscopy studies of human TFIID: conformational breathing in the integration of gene regulatory cues

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

TAF4 inactivation in embryonic fibroblasts activates TGF beta signalling and autocrine growth.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

SUMO-1 modification of human transcription factor (TF) IID complex subunits: inhibition of TFIID promoter-binding activity through SUMO-1 modification of hsTAF5

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Growth-regulated recruitment of the essential yeast ribosomal protein gene activator Ifh1.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Core promoter binding by histone-like TAF complexes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Regulatory diversity among metazoan co-activator complexes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Mapping key functional sites within yeast TFIID

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Targeting Activity Is Required for SWI/SNF Function In Vivo and Is Accomplished through Two Partially Redundant Activator-Interaction Domains

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Use of a genetically introduced cross-linker to identify interaction sites of acidic activators within native transcription factor IID and SAGA.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Crystal structure of a subcomplex of human transcription factor TFIID formed by TATA binding protein-associated factors hTAF4 (hTAF(II)135) and hTAF12 (hTAF(II)20)

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Mapping histone fold TAFs within yeast TFIID.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Proteomics of the eukaryotic transcription machinery: identification of proteins associated with components of yeast TFIID by multidimensional mass spectrometry

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Analysis of TAF90 mutants displaying allele-specific and broad defects in transcription

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Positive and negative TAF(II) functions that suggest a dynamic TFIID structure and elicit synergy with traps in activator-induced transcription

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Promoter-specific binding of Rap1 revealed by genome-wide maps of protein-DNA association

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

TAFs revisited: more data reveal new twists and confirm old ideas

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Three-dimensional structures of the TAFII-containing complexes TFIID and TFTC.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

The economics of ribosome biosynthesis in yeast

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Binding of TBP to promoters in vivo is stimulated by activators and requires Pol II holoenzyme

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

The mammalian transcriptional repressor RBP (CBF1) targets TFIID and TFIIA to prevent activated transcription

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Transcriptional activation by recruitment

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Yeast homologues of higher eukaryotic TFIID subunits

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Identification and characterization of a TFIID-like multiprotein complex from Saccharomyces cerevisiae

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Phosphorylation influences the binding of the yeast RAP1 protein to the upstream activating sequence of the PGK gene

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2865315

Molecular characterization of Saccharomyces cerevisiae TFIID.

28 July 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.104810

A unified nomenclature for TATA box binding protein (TBP)-associated factors (TAFs) involved in RNA polymerase II transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.104810

Recent advances in understanding the structure and function of general transcription factor TFIID.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.104810

Distinct classes of yeast promoters revealed by differential TAF recruitment

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.104810

Activator-specific recruitment of TFIID and regulation of ribosomal protein genes in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.104810

Where does mediator bind in vivo?

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.104810

A TATA binding protein regulatory network that governs transcription complex assembly.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.104810

A canonical promoter organization of the transcription machinery and its regulators in the Saccharomyces genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.104810

Interaction of transcriptional regulators with specific nucleosomes across the Saccharomyces genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.104810

The tor pathway regulates gene expression by linking nutrient sensing to histone acetylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.104810

Functional analysis of the TFIID-specific yeast TAF4 (yTAF(II)48) reveals an unexpected organization of its histone-fold domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.104810

Targets of the Gal4 transcription activator in functional transcription complexes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.104810

Retinoic acid induces TGFbeta-dependent autocrine fibroblast growth

21 January 2018

1 reference

12 December 2020

Activator-specific recruitment of Mediator in vivo

1 reference

12 December 2020

What better measure than ribosome synthesis?

1 reference

12 December 2020

Three-dimensional structure of the human TFIID-IIA-IIB complex

1 reference

12 December 2020

Identifiers

DOI

10.1074/JBC.M110.104810

1 reference

29 July 2017

1 reference

29 July 2017

1 reference