(Q33889377)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20156993%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

title

Boosting the prediction and understanding of DNA-binding domains from sequence (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20156993%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20156993%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

author name string

Robert E Langlois

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20156993%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

language of work or name

English

0 references

publication date

15 February 2010

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20156993%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

published in

Nucleic Acids Research

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20156993%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

volume

38

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20156993%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

issue

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20156993%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

page(s)

3149-3158

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20156993%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution-NonCommercial 2.5 Generic

18 January 2020

copyright license

start time

10 May 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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5 July 2018

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5 July 2018

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Residue-level prediction of DNA-binding sites and its application on DNA-binding protein predictions.

5 July 2018

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5 July 2018

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5 July 2018

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Structural bioinformatics prediction of membrane-binding proteins

5 July 2018

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Efficient prediction of nucleic acid binding function from low-resolution protein structures.

5 July 2018

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Kernel-based machine learning protocol for predicting DNA-binding proteins

5 July 2018

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Detecting DNA-binding helix-turn-helix structural motifs using sequence and structure information

5 July 2018

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Intron-encoded homing endonuclease I-TevI also functions as a transcriptional autorepressor

5 July 2018

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Identifying DNA-binding proteins using structural motifs and the electrostatic potential

5 July 2018

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Moment-based prediction of DNA-binding proteins

5 July 2018

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ChIP-chip: considerations for the design, analysis, and application of genome-wide chromatin immunoprecipitation experiments

5 July 2018

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PISCES: a protein sequence culling server

5 July 2018

1 reference

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DNA binding and cleavage by the periplasmic nuclease Vvn: a novel structure with a known active site

5 July 2018

1 reference

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Crystal Structure of the Hyperthermophilic Archaeal DNA-Binding Protein Sso10b2 at a Resolution of 1.85 Angstroms

5 July 2018

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Annotating nucleic acid-binding function based on protein structure.

5 July 2018

1 reference

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DNA binding sites: representation and discovery

5 July 2018

1 reference

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Crosslinking the EcoRV restriction endonuclease across the DNA-binding site reveals transient intermediates and conformational changes of the enzyme during DNA binding and catalytic turnover

5 July 2018

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Structure of the metal-ion-activated diphtheria toxin repressor/tox operator complex

5 July 2018

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

5 July 2018

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Recognition and cleavage of DNA by type-II restriction endonucleases

5 July 2018

1 reference

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Molecular and genetic analysis of the toxic effect of RAP1 overexpression in yeast

5 July 2018

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Atomic model of a pyrimidine dimer excision repair enzyme complexed with a DNA substrate: structural basis for damaged DNA recognition

5 July 2018

1 reference

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Improved prediction of protein secondary structure by use of sequence profiles and neural networks

5 July 2018

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5 July 2018

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Electrostatics and flexibility in protein-DNA interactions

5 July 2018

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5 July 2018

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4-Hydroxynonenal induces a DNA-binding protein similar to the heat-shock factor

5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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Analysis and prediction of DNA-binding proteins and their binding residues based on composition, sequence and structural information

5 July 2018

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Predicting rRNA-, RNA-, and DNA-binding proteins from primary structure with support vector machines.

21 January 2018

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Support vector machines for predicting rRNA-, RNA-, and DNA-binding proteins from amino acid sequence.

21 January 2018

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Using evolutionary and structural information to predict DNA-binding sites on DNA-binding proteins

21 January 2018

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Learning to translate sequence and structure to function: identifying DNA binding and membrane binding proteins

21 January 2018

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Protein-DNA interactions: amino acid conservation and the effects of mutations on binding specificity

21 January 2018

1 reference

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Specific DNA recognition by EcoRV restriction endonuclease induced by calcium ions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ061

Intelligible machine learning with malibu.

21 January 2018

1 reference

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Structure Based Prediction of Binding Residues on DNA-binding Proteins.

29 October 2018

1 reference

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ANN-Spec: a method for discovering transcription factor binding sites with improved specificity.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2879530

Prediction and classification of protein subcellular location-sequence-order effect and pseudo amino acid composition

29 October 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ061

On the Divalent Metal Ion Dependence of DNA Cleavage by Restriction Endonucleases of the EcoRI Family

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ061

Mutations at position 277 modify the DNA-binding specificity of human p53 in vitro

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20156993

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Catalytic and DNA binding properties of PvuII restriction endonuclease mutants

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20156993

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKQ061

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20156993%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20156993%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

PubMed publication ID

20156993

1 reference