(Q33899367)

29 July 2017

Java web tools for PCR, in silico PCR, and oligonucleotide assembly and analysis (English)

1 reference

29 July 2017

1 reference

Ruslan Kalendar

1

1 reference

PubMed ID

21569836

29 July 2017

David Lee

series ordinal

2

1 reference

PubMed ID

21569836

29 July 2017

Alan H Schulman

series ordinal

3

1 reference

29 July 2017

3 May 2011

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29 July 2017

1 reference

29 July 2017

98

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29 July 2017

2

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29 July 2017

137-144

1 reference

Recent developments in primer design for DNA polymorphism and mRNA profiling in higher plants

29 July 2017

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

PerlPrimer: cross-platform, graphical primer design for standard, bisulphite and real-time PCR.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

IDT SciTools: a suite for analysis and design of nucleic acid oligomers

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

UniPrime: a workflow-based platform for improved universal primer design

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Primaclade--a flexible tool to find conserved PCR primers across multiple species.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Primique: automatic design of specific PCR primers for each sequence in a family

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

7 January 2021

The BiSearch web server

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Design factors that influence PCR amplification success of cross-species primers among 1147 mammalian primer pairs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

IRAP and REMAP for retrotransposon-based genotyping and fingerprinting

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Thermodynamics and NMR of internal G.T mismatches in DNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Nearest-neighbor thermodynamics and NMR of DNA sequences with internal A.A, C.C, G.G, and T.T mismatches

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Improved thermodynamic parameters and helix initiation factor to predict stability of DNA duplexes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Thermodynamic parameters for DNA sequences with dangling ends

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Sequence complexity and DNA curvature

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Complexity: an internet resource for analysis of DNA sequence complexity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

The non-B-DNA structure of d(CA/TG)n does not differ from that of Z-DNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Guanine quartet structures

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Quadruplex DNA: sequence, topology and structure

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

How long is too long? Effects of loop size on G-quadruplex stability

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Predicting and understanding the stability of G-quadruplexes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Regionalized GC content of template DNA as a predictor of PCR success

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Predicting failure rate of PCR in large genomes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Evaluation of the impact of single nucleotide polymorphisms and primer mismatches on quantitative PCR.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

The statistical-thermodynamic basis for computation of binding affinities: a critical review

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

MELTING, computing the melting temperature of nucleic acid duplex.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Nearest-neighbor thermodynamics of deoxyinosine pairs in DNA duplexes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Fingerprinting genomes using PCR with arbitrary primers

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

DNA polymorphisms amplified by arbitrary primers are useful as genetic markers

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Stowaway: a new family of inverted repeat elements associated with the genes of both monocotyledonous and dicotyledonous plants

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Alu polymerase chain reaction: a method for rapid isolation of human-specific sequences from complex DNA sources

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Alumorphs--human DNA polymorphisms detected by polymerase chain reaction using Alu-specific primers

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Repbase Update, a database of eukaryotic repetitive elements

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Gene splicing and mutagenesis by PCR-driven overlap extension

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Ordered catenation of sequence-tagged sites and multiplexed SNP genotyping by sequencing

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Circular polymerase extension cloning of complex gene libraries and pathways

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

TmPrime: fast, flexible oligonucleotide design software for gene synthesis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Two-step total gene synthesis method

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Gene2Oligo: oligonucleotide design for in vitro gene synthesis.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Predicting the success of primer extension genotyping assays using statistical modeling

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

PUNS: transcriptomic- and genomic-in silico PCR for enhanced primer design

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Information theory-based algorithm for in silico prediction of PCR products with whole genomic sequences as templates.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

A mathematical model and a computerized simulation of PCR using complex templates

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

PRIMEX: rapid identification of oligonucleotide matches in whole genomes.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

Whole genome sequence-enabled prediction of sequences performed for random PCR products of Escherichia coli

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2011.04.009

10.1016/J.YGENO.2011.04.009

7 January 2021

Identifiers

DOI

1 reference

29 July 2017

1 reference

PubMed ID

21569836