(Q33901921)

29 July 2017

ResponseNet: revealing signaling and regulatory networks linking genetic and transcriptomic screening data (English)

1 reference

29 July 2017

0 references

6

Esti Yeger-Lotem

0 references

Ernest Fraenkel

object named as

Ernest Fraenkel

5

0 references

Susan Lindquist

4

object named as

Susan Lindquist

1 reference

29 July 2017

Alex Lan

1

1 reference

29 July 2017

Ilan Y Smoly

2

1 reference

29 July 2017

Guy Rapaport

3

1 reference

29 July 2017

language of work or name

English

0 references

publication date

16 May 2011

1 reference

29 July 2017

Nucleic Acids Research

1 reference

29 July 2017

39

1 reference

29 July 2017

Web Server issue

1 reference

29 July 2017

W424-9

1 reference

Creative Commons Attribution-NonCommercial 3.0 Unported

29 July 2017

start time

14 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Phosphoproteomic analysis reveals interconnected system-wide responses to perturbations of kinases and phosphatases in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

An integrated approach to uncover drivers of cancer.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

Cytoscape Web: an interactive web-based network browser

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

A global protein kinase and phosphatase interaction network in yeast.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

A physical and regulatory map of host-influenza interactions reveals pathways in H1N1 infection

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

Compounds from an unbiased chemical screen reverse both ER-to-Golgi trafficking defects and mitochondrial dysfunction in Parkinson's disease models

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

Unbiased reconstruction of a mammalian transcriptional network mediating pathogen responses

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

Integrating proteomic, transcriptional, and interactome data reveals hidden components of signaling and regulatory networks

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

Information flow analysis of interactome networks

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

Toward accurate reconstruction of functional protein networks

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

Validation of candidate causal genes for obesity that affect shared metabolic pathways and networks

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

Functional organization of the S. cerevisiae phosphorylation network

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

Integrating siRNA and protein-protein interaction data to identify an expanded insulin signaling network

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

Bridging high-throughput genetic and transcriptional data reveals cellular responses to alpha-synuclein toxicity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

The chemical genomic portrait of yeast: uncovering a phenotype for all genes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

eQED: an efficient method for interpreting eQTL associations using protein networks

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

Integration of biological networks and gene expression data using Cytoscape

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

The Connectivity Map: using gene-expression signatures to connect small molecules, genes, and disease

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

Expression and functional profiling reveal distinct gene classes involved in fatty acid metabolism

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

Genome-wide responses to DNA-damaging agents.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

Integrating phenotypic and expression profiles to map arsenic-response networks

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

Parallel phenotypic analysis of sporulation and postgermination growth in Saccharomyces cerevisiae

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

Transcriptional response of Saccharomyces cerevisiae to DNA-damaging agents does not identify the genes that protect against these agents

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

Genomic expression programs in the response of yeast cells to environmental changes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125767

A network view of disease and compound screening

5 July 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKR359

Functional overlap and regulatory links shape genetic interactions between signaling pathways.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKR359

21 January 2018

Physical network models.

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKR359

An integrative approach for causal gene identification and gene regulatory pathway inference

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKR359

SPINE: a framework for signaling-regulatory pathway inference from cause-effect experiments.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKR359

Exploring the Mode-of-Action of Bioactive Compounds by Chemical-Genetic Profiling in Yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKR359

21 January 2018

Identifiers

DOI

10.1093/NAR/GKR359

1 reference

29 July 2017

journals/nar/LanSRLFL11

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

29 July 2017

1 reference