(Q33910769)

English

Quantitative shotgun proteomics using a uniform ¹⁵N-labeled standard to monitor proteome dynamics in time course experiments reveals new insights into the heat stress response of Chlamydomonas reinhardtii

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scholarly article

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2 February 2020

Quantitative shotgun proteomics using a uniform ¹⁵N-labeled standard to monitor proteome dynamics in time course experiments reveals new insights into the heat stress response of Chlamydomonas reinhardtii (English)

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2 February 2020

Chlamydomonas reinhardtii

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based on heuristic

inferred from title

Shotgun proteomics

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based on heuristic

inferred from title

1

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2 February 2020

author name string

Julia Weiss

2

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2 February 2020

Dorothea Hemme

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2 February 2020

Frederik Sommer

4

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2 February 2020

Michael Schroda

5

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2 February 2020

publication date

24 May 2011

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2 February 2020

Molecular & Cellular Proteomics

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2 February 2020

10

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2 February 2020

9

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2 February 2020

M110.004739

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2 February 2020

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

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5 July 2018

Evaluation of the Consensus of Four Peptide Identification Algorithms for Tandem Mass Spectrometry Based Proteomics.

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RNA-seq analysis of sulfur-deprived Chlamydomonas cells reveals aspects of acclimation critical for cell survival

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Characterizing the anaerobic response of Chlamydomonas reinhardtii by quantitative proteomics

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Proteomic analysis of temperature stress in plants.

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Physiological and molecular changes in Oryza meridionalis Ng., a heat-tolerant species of wild rice

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Full dynamic range proteome analysis of S. cerevisiae by targeted proteomics

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A practical guide to the MaxQuant computational platform for SILAC-based quantitative proteomics

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Sequential interplay between BAG6 and HSP70 upon heat shock

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5 July 2018

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

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Root proteomic responses to heat stress in two Agrostis grass species contrasting in heat tolerance

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Ascorbate peroxidase 1 plays a key role in the response of Arabidopsis thaliana to stress combination

1 reference

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1 reference

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Heat stress: an overview of molecular responses in photosynthesis.

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The effect of drought and heat stress on reproductive processes in cereals

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The Chlamydomonas genome reveals the evolution of key animal and plant functions

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A chloroplast cyclophilin functions in the assembly and maintenance of photosystem II in Arabidopsis thaliana

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A proteomic approach in analyzing heat-responsive proteins in rice leaves

1 reference

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5 July 2018

Quantitative mass spectrometry in proteomics: a critical review

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5 July 2018

Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry

1 reference

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Enrichment or depletion of a GO category within a class of genes: which test?

1 reference

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5 July 2018

Mass spectrometric genomic data mining: Novel insights into bioenergetic pathways in Chlamydomonas reinhardtii

1 reference

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5 July 2018

Metabolic labeling of plant cell cultures with K(15)NO3 as a tool for quantitative analysis of proteins and metabolites

1 reference

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5 July 2018

Proteome profiling of Populus euphratica Oliv. upon heat stress

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A uniform proteomics MS/MS analysis platform utilizing open XML file formats

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Synthesis, transport and localization of a nuclear coded 22-kd heat-shock protein in the chloroplast membranes of peas and Chlamydomonas reinhardi.

1 reference

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1 reference

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5 July 2018

Some like it hot: the structure and function of small heat-shock proteins.

1 reference

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5 July 2018

AtBAG6, a novel calmodulin-binding protein, induces programmed cell death in yeast and plants

1 reference

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5 July 2018

HEAT SHOCK PROTEIN 90C is a bona fide Hsp90 that interacts with plastidic HSP70B in Chlamydomonas reinhardtii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186191

5 July 2018

SMC proteins and chromosome mechanics: from bacteria to humans

1 reference

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5 July 2018

Chlamydomonas immunophilins and parvulins: survey and critical assessment of gene models

1 reference

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5 July 2018

Regulation of Hsp70 function by HspBP1: structural analysis reveals an alternate mechanism for Hsp70 nucleotide exchange

1 reference

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5 July 2018

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MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes

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TANDEM: matching proteins with tandem mass spectra

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5 July 2018

Proteomic analysis of the effect of heat stress on hexaploid wheat grain: characterization of heat-responsive proteins from non-prolamins fraction

1 reference

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The bacterial universal stress protein: function and regulation

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Proteomic analysis of the effect of heat stress on hexaploid wheat grain: Characterization of heat-responsive proteins from total endosperm

1 reference

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Analysis of quantitative proteomic data generated via multidimensional protein identification technology

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Arabidopsis and the heat stress transcription factor world: how many heat stress transcription factors do we need?

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Protein misfolding and temperature up-shift cause G1 arrest via a common mechanism dependent on heat shock factor in Saccharomycescerevisiae

1 reference

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Rubisco activase constrains the photosynthetic potential of leaves at high temperature and CO2

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Heat shock effects on cell cycle progression

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1 reference

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1 reference

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1 reference

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Light-inducible gene HSP70B encodes a chloroplast-localized heat shock protein in Chlamydomonas reinhardtii

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1 reference

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29 October 2018

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29 October 2018

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1 reference

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29 October 2018

Photosynthetic electron transport and proton flux under moderate heat stress.

1 reference

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29 October 2018

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1 reference

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29 October 2018

Implications of 15N-metabolic labeling for automated peptide identification in Arabidopsis thaliana.

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29 October 2018

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29 October 2018

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29 October 2018

The Chlamydomonas genome reveals its secrets: chaperone genes and the potential roles of their gene products in the chloroplast.

1 reference

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29 October 2018

Metabolic labeling of mammalian organisms with stable isotopes for quantitative proteomic analysis

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29 October 2018

Absolute quantification of proteins in solutions and in polyacrylamide gels by mass spectrometry

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29 October 2018

Metabolic labeling of C. elegans and D. melanogaster for quantitative proteomics.

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29 October 2018

Refolding of substrates bound to small Hsps relies on a disaggregation reaction mediated most efficiently by ClpB/DnaK.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186191

29 October 2018

The novel ethylene-regulated gene OsUsp1 from rice encodes a member of a plant protein family related to prokaryotic universal stress proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186191

29 October 2018

The chloroplastic GrpE homolog of Chlamydomonas: two isoforms generated by differential splicing.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186191

29 October 2018

Heat shock protein 101 plays a crucial role in thermotolerance in Arabidopsis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186191

29 October 2018

Identification and Functional Characterization of the BAG Protein Family inArabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186191

10 December 2018

Acclimation of the photosynthetic machinery to high temperature in Chlamydomonas reinhardtii requires synthesis de novo of proteins encoded by the nuclear and chloroplast genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/21610104

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A chloroplast-targeted heat shock protein 70 (HSP70) contributes to the photoprotection and repair of photosystem II during and after photoinhibition

1 reference

https://pubmed.ncbi.nlm.nih.gov/21610104

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Heat shock factor 1 is a key regulator of the stress response in Chlamydomonas

1 reference

https://pubmed.ncbi.nlm.nih.gov/21610104

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Arabidopsis ClpB/Hsp100 family of proteins: chaperones for stress and chloroplast development

1 reference

https://pubmed.ncbi.nlm.nih.gov/21610104

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The chloroplast ATP synthase in Chlamydomonas reinhardtii. I. Characterization of its nine constitutive subunits

1 reference

https://pubmed.ncbi.nlm.nih.gov/21610104

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative quantitative proteomics to investigate the remodeling of bioenergetic pathways under iron deficiency inChlamydomonas reinhardtii

1 reference

https://pubmed.ncbi.nlm.nih.gov/21610104

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Heat-shock response in Arabidopsis thaliana explored by multiplexed quantitative proteomics using differential metabolic labeling

1 reference

https://pubmed.ncbi.nlm.nih.gov/21610104

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Proteomic analysis of small heat shock protein isoforms in barley shoots

1 reference

https://pubmed.ncbi.nlm.nih.gov/21610104

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1074/MCP.M110.004739

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21610104%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

release_5kkqas4ryfdwzaodreeeop4isy

1 reference

https://api.fatcat.wiki/v0/release/5kkqas4ryfdwzaodreeeop4isy

24 November 2022

based on heuristic

mapped directly with Wikidata item

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21610104%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21610104%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

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