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The genome of the white-rot fungus Pycnoporus cinnabarinus: a basidiomycete model with a versatile arsenal for lignocellulosic biomass breakdown

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30 July 2017

The genome of the white-rot fungus Pycnoporus cinnabarinus: a basidiomycete model with a versatile arsenal for lignocellulosic biomass breakdown (English)

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30 July 2017

Comparative analyses of Podospora anserina secretomes reveal a large array of lignocellulose-active enzymes

1 reference

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5 July 2018

The carbohydrate-active enzymes database (CAZy) in 2013

1 reference

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5 July 2018

Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymes

1 reference

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5 July 2018

Fungal laccase, manganese peroxidase and lignin peroxidase: gene expression and regulation

1 reference

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5 July 2018

Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche

1 reference

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5 July 2018

NG6: Integrated next generation sequencing storage and processing environment

1 reference

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5 July 2018

The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes

1 reference

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5 July 2018

Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis

1 reference

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5 July 2018

Post-genomic analyses of fungal lignocellulosic biomass degradation reveal the unexpected potential of the plant pathogen Ustilago maydis

1 reference

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5 July 2018

Heterologous expression of Pycnoporus cinnabarinus cellobiose dehydrogenase in Pichia pastoris and involvement in saccharification processes

1 reference

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5 July 2018

Potential applications of laccase-mediated coupling and grafting reactions: a review

1 reference

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5 July 2018

Peculiarities of Pycnoporus species for applications in biotechnology

1 reference

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5 July 2018

Galactofuranose in eukaryotes: aspects of biosynthesis and functional impact.

1 reference

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5 July 2018

The Plant Cell Wall-Decomposing Machinery Underlies the Functional Diversity of Forest Fungi

1 reference

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Assessment of replicate bias in 454 pyrosequencing and a multi-purpose read-filtering tool

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5 July 2018

HMMER web server: interactive sequence similarity searching

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5 July 2018

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

1 reference

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5 July 2018

The role of duplications in the evolution of genomes highlights the need for evolutionary-based approaches in comparative genomics

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5 July 2018

A Single Mating-Type Locus Composed of Homeodomain Genes Promotes Nuclear Migration and Heterokaryosis in the White-Rot Fungus Phanerochaete chrysosporium

1 reference

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5 July 2018

Uses of laccases in the food industry.

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Characterization of three mnp genes of Fomitiporia mediterranea and report of additional class II peroxidases in the order hymenochaetales

1 reference

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5 July 2018

Genome sequence of the model mushroom Schizophyllum commune

1 reference

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5 July 2018

New and classic families of secreted fungal heme peroxidases.

1 reference

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5 July 2018

High redox potential laccases from the ligninolytic fungi Pycnoporus coccineus and Pycnoporus sanguineus suitable for white biotechnology: from gene cloning to enzyme characterization and applications.

1 reference

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5 July 2018

Stress-sensing mechanisms in the unfolded protein response: similarities and differences between yeast and mammals

1 reference

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5 July 2018

Kraft pulp biobleaching using an extracellular enzymatic fluid produced by Pycnoporus sanguineus.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4101180

5 July 2018

Laccases: a never-ending story

1 reference

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Occurrence, properties, and applications of feruloyl esterases.

1 reference

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The structure, function, and biosynthesis of plant cell wall pectic polysaccharides

1 reference

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Genomic and biochemical analysis of N glycosylation in the mushroom-forming basidiomycete Schizophyllum commune

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4101180

5 July 2018

Strategies for reliable exploitation of evolutionary concepts in high throughput biology.

1 reference

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5 July 2018

Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4101180

5 July 2018

Protein structure homology modeling using SWISS-MODEL workspace.

1 reference

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5 July 2018

Lignocellulosic residues: biodegradation and bioconversion by fungi.

1 reference

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5 July 2018

The Pleurotus ostreatus laccase multi-gene family: isolation and heterologous expression of new family members

1 reference

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5 July 2018

Substrate oxidation sites in versatile peroxidase and other basidiomycete peroxidases.

1 reference

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5 July 2018

The genome sequence of the model ascomycete fungus Podospora anserina

1 reference

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5 July 2018

Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina)

1 reference

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Conceptual bases for quantifying the role of the environment on gene evolution: the participation of positive selection and neutral evolution

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5 July 2018

The Stacking Tryptophan of Galactose Oxidase: A Second-Coordination Sphere Residue that Has Profound Effects on Tyrosyl Radical Behavior and Enzyme Catalysis † , ‡

1 reference

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5 July 2018

Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88

1 reference

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5 July 2018

Structure, organization, and transcriptional regulation of a family of copper radical oxidase genes in the lignin-degrading basidiomycete Phanerochaete chrysosporium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4101180

5 July 2018

Heme-thiolate haloperoxidases: versatile biocatalysts with biotechnological and environmental significance

1 reference

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5 July 2018

Biodegradation of lignocellulosics: microbial, chemical, and enzymatic aspects of the fungal attack of lignin.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4101180

5 July 2018

Repbase Update, a database of eukaryotic repetitive elements

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5 July 2018

De novo identification of repeat families in large genomes

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5 July 2018

Lignin-derived compounds as efficient laccase mediators for decolorization of different types of recalcitrant dyes.

1 reference

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5 July 2018

Screening of basidiomycetes and xylariaceous fungi for lignin peroxidase and laccase gene-specific sequences

1 reference

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5 July 2018

Characterization of a new tyrosinase from Pycnoporus species with high potential for food technological applications

1 reference

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5 July 2018

Highly efficient production of laccase by the basidiomycete Pycnoporus cinnabarinus.

1 reference

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Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78

1 reference

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OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes

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5 July 2018

Hemicellulose bioconversion

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1 reference

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Gene ontology: tool for the unification of biology

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5 July 2018

Cloning and analysis of Pycnoporus cinnabarinus cellobiose dehydrogenase.

1 reference

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5 July 2018

Tandem repeats finder: a program to analyze DNA sequences

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5 July 2018

Molecular analysis of a laccase gene from the white rot fungus Pycnoporus cinnabarinus

1 reference

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5 July 2018

Molecular genetics of mating recognition in basidiomycete fungi

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A two-step bioconversion process for vanillin production from ferulic acid combining Aspergillus niger and Pycnoporus cinnabarinus

1 reference

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5 July 2018

Cloning and characterization of three laccase genes from the white-rot basidiomycete Trametes villosa: genomic organization of the laccase gene family

1 reference

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5 July 2018

The ligninolytic system of the white rot fungus Pycnoporus cinnabarinus: purification and characterization of the laccase

1 reference

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5 July 2018

Lip-like genes in Phanerochaete sordida and Ceriporiopsis subvermispora, white rot fungi with no detectable lignin peroxidase activity.

1 reference

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5 July 2018

The identification and characterization of four laccases from the plant pathogenic fungus Rhizoctonia solani

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5 July 2018

Enzymatic "combustion": the microbial degradation of lignin

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5 July 2018

Basic local alignment search tool

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5 July 2018

Homeodomains and regulation of sexual development in basidiomycetes.

1 reference

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5 July 2018

Ovalbumin gene: evidence for a leader sequence in mRNA and DNA sequences at the exon-intron boundaries

1 reference

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5 July 2018

Polyporales genomes reveal the genetic architecture underlying tetrapolar and bipolar mating systems.

1 reference

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29 October 2018

Lignin-degrading peroxidases in Polyporales: an evolutionary survey based on 10 sequenced genomes

1 reference

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29 October 2018

Characterization of salt-adapted secreted lignocellulolytic enzymes from the mangrove fungus Pestalotiopsis sp.

1 reference

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29 October 2018

Pleurotus ostreatus heme peroxidases: an in silico analysis from the genome sequence to the enzyme molecular structure.

1 reference

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29 October 2018

Mating-type orthologous genes in the primarily homothallic Moniliophthora perniciosa, the causal agent of Witches' Broom Disease in cacao.

1 reference

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29 October 2018

Production of laccase from Pleurotus florida using agro-wastes and efficient decolorization of Reactive blue 198.

1 reference

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29 October 2018

Fusion of a family 1 carbohydrate binding module of Aspergillus niger to the Pycnoporus cinnabarinus laccase for efficient softwood kraft pulp biobleaching.

1 reference

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29 October 2018

Effect of growth substrate, method of fermentation, and nitrogen source on lignocellulose-degrading enzymes production by white-rot basidiomycetes.

1 reference

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29 October 2018

Gene organization of the mating type regions in the ectomycorrhizal fungus Laccaria bicolor reveals distinct evolution between the two mating type loci.

1 reference

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29 October 2018

Biosorption of copper (II) onto immobilized cells of Pycnoporus sanguineus from aqueous solution: equilibrium and kinetic studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4101180

29 October 2018

Purification and characterization of laccase from Pycnoporus sanguineus and decolorization of an anthraquinone dye by the enzyme.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4101180

29 October 2018

AUGUSTUS at EGASP: using EST, protein and genomic alignments for improved gene prediction in the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4101180

29 October 2018

Phylogenetic comparison and classification of laccase and related multicopper oxidase protein sequences.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4101180

29 October 2018

Cloning of novel laccase isozyme genes from Trametes sp. AH28-2 and analyses of their differential expression.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4101180

29 October 2018

Isolation of five laccase gene sequences from the white-rot fungus Trametes sanguinea by PCR, and cloning, characterization and expression of the laccase cDNA in yeasts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4101180

29 October 2018

Natural and recombinant fungal laccases for paper pulp bleaching

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4101180

29 October 2018

Overproduction of laccase by a monokaryotic strain of Pycnoporus cinnabarinus using ethanol as inducer.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4101180

29 October 2018

LTR_STRUC: a novel search and identification program for LTR retrotransposons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4101180

29 October 2018

Differential regulation of laccase gene expression in Pleurotus sajor-caju.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4101180

29 October 2018

A cluster of genes encoding major isozymes of lignin peroxidase and manganese peroxidase from the white-rot fungus Trametes versicolor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4101180

29 October 2018

The laccase multi-gene family in Coprinopsis cinerea has seventeen different members that divide into two distinct subfamilies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4101180

29 October 2018

Evolution of the gene encoding mitochondrial intermediate peptidase and its cosegregation with the A mating-type locus of mushroom fungi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4101180

29 October 2018

Heterodimerization between two classes of homeodomain proteins in the mushroom Coprinus cinereus brings together potential DNA-binding and activation domains

1 reference

https://pubmed.ncbi.nlm.nih.gov/24942338

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Isolation of two laccase genes from the white-rot fungus Pleurotus eryngii and heterologous expression of the pel3 encoded protein

1 reference

https://pubmed.ncbi.nlm.nih.gov/24942338

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The structure of laccase protein and its synthesis by the commercial mushroom Agaricus bisporus

1 reference

https://pubmed.ncbi.nlm.nih.gov/24942338

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Selection of Pycnoporus cinnabarinus strains for laccase production

1 reference

https://pubmed.ncbi.nlm.nih.gov/24942338

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Isolation of a new laccase isoform from the white-rot fungi Pycnoporus cinnabarinus strain ss3

1 reference

https://pubmed.ncbi.nlm.nih.gov/24942338

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of catalytic residues in glyoxal oxidase by targeted mutagenesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/24942338

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Morphology and laccase production of white-rot fungi grown on wheat bran flakes under semi-solid-state fermentation conditions

1 reference

https://pubmed.ncbi.nlm.nih.gov/24942338

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Production of Hydroxyl Radical by the Synergistic Action of Fungal Laccase and Aryl Alcohol Oxidase

1 reference

https://pubmed.ncbi.nlm.nih.gov/24942338

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2164-15-486

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Dimensions Publication ID

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-15-486

9 September 2019

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

ResearchGate publication ID

0 references

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