(Q33917383)

English

The mitochondrial genome sequence of the ciliate Paramecium caudatum reveals a shift in nucleotide composition and codon usage within the genus Paramecium

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scholarly article

1 reference

Europe PubMed Central

30 July 2017

The mitochondrial genome sequence of the ciliate Paramecium caudatum reveals a shift in nucleotide composition and codon usage within the genus Paramecium (English)

1 reference

Europe PubMed Central

30 July 2017

Paramecium caudatum

object named as

Paramecium caudatum

1 reference

based on heuristic

inferred from title

author name string

Dana Barth

1

1 reference

Europe PubMed Central

30 July 2017

Thomas U Berendonk

2

1 reference

Europe PubMed Central

30 July 2017

language of work or name

0 references

publication date

31 May 2011

1 reference

Europe PubMed Central

30 July 2017

1 reference

Europe PubMed Central

30 July 2017

12

1 reference

Europe PubMed Central

30 July 2017

272

1 reference

Europe PubMed Central

30 July 2017

https://scigraph.springernature.com/pub.10.1186/1471-2164-12-272

0 references

The mitochondrial genomes of the ciliates Euplotes minuta and Euplotes crassus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118789

28 July 2018

Cytochrome b sequence data suggest rapid speciation within the Paramecium aurelia species complex.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118789

28 July 2018

Relaxation of yeast mitochondrial functions after whole-genome duplication

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118789

28 July 2018

Diagnosing mitochondrial DNA diversity: applications of a sentinel gene approach.

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28 July 2018

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28 July 2018

Complete mitochondrial genome sequence of three Tetrahymena species reveals mutation hot spots and accelerated nonsynonymous substitutions in Ymf genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118789

28 July 2018

KaKs_Calculator: calculating Ka and Ks through model selection and model averaging

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118789

28 July 2018

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

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28 July 2018

DNA barcodes provide a quick preview of mitochondrial genome composition

1 reference

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28 July 2018

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1 reference

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Mitochondrial genome sequence evolution in Chlamydomonas

1 reference

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28 July 2018

Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118789

28 July 2018

Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118789

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Intragenic tandem repeats generate functional variability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118789

28 July 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118789

28 July 2018

Viewing and annotating sequence data with Artemis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118789

28 July 2018

Biased gene conversion: implications for genome and sex evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118789

28 July 2018

Complete sequence of the mitochondrial genome of Tetrahymena thermophila and comparative methods for identifying highly divergent genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118789

28 July 2018

Phylogenetic relationships of the Subclass Peniculia (Oligohymenophorea, Ciliophora) inferred from small subunit rRNA gene sequences

1 reference

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28 July 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118789

28 July 2018

Minisatellite instability and germline mutation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118789

28 July 2018

Genome structure and gene content in protist mitochondrial DNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118789

28 July 2018

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118789

28 July 2018

Relationships between genomic G+C content, RNA secondary structures, and optimal growth temperature in prokaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118789

28 July 2018

Direct amplification of unknown genes and fragments by Uneven polymerase chain reaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118789

28 July 2018

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118789

28 July 2018

https://api.crossref.org/works/10.1186%2F1471-2164-12-272

21 January 2018

The human genome: organization and evolutionary history

1 reference

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Trinucleotide repeats and long homopeptides in genes and proteins associated with nervous system disease and development

1 reference

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28 July 2018

Nucleotide sequence of the mitochondrial genome of Paramecium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118789

28 July 2018

The 'effective number of codons' used in a gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118789

28 July 2018

Patterns of codon usage in two ciliates that reassign the genetic code: Tetrahymena thermophila and Paramecium tetraurelia.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-272

21 January 2018

Genetic diversity in the Paramecium aurelia species complex.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-272

21 January 2018

Rapid concerted evolution in animal mitochondrial DNA.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-272

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1 reference

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21 January 2018

Statistical methods for detecting molecular adaptation

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-272

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1 reference

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Diversity in coding tandem repeats in related Neisseria spp

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-272

21 January 2018

Intraspecific genetic variation in Paramecium revealed by mitochondrial cytochrome C oxidase I sequences.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-272

21 January 2018

A codon-based model of nucleotide substitution for protein-coding DNA sequences

1 reference

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29 October 2018

Morphological and molecular investigations of Paramecium schewiakoffi sp. nov. (Ciliophora, Oligohymenophorea) and current status of distribution and taxonomy of Paramecium spp

1 reference

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21 January 2018

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1 reference

https://pubmed.ncbi.nlm.nih.gov/21627782

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based on heuristic

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1 reference

https://pubmed.ncbi.nlm.nih.gov/21627782

12 December 2020

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inferred from PubMed ID database lookup

The Paramecium aurelia species complex, frequency and co-occurrence across Europe

1 reference

https://pubmed.ncbi.nlm.nih.gov/21627782

12 December 2020

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inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2164-12-272

1 reference

Europe PubMed Central

30 July 2017

Dimensions Publication ID

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-12-272

9 September 2019

1 reference

Europe PubMed Central

30 July 2017

1 reference

Europe PubMed Central

30 July 2017

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