(Q33963389)

English

Highly discriminatory single-nucleotide polymorphism interrogation of Escherichia coli by use of allele-specific real-time PCR and eBURST analysis

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Highly discriminatory single-nucleotide polymorphism interrogation of Escherichia coli by use of allele-specific real-time PCR and eBURST analysis (English)

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Escherichia coli

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single-nucleotide polymorphism

1 reference

based on heuristic

inferred from title

author name string

Maxim S Sheludchenko

1

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Flavia Huygens

2

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Megan H Hargreaves

3

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

language of work or name

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publication date

7 May 2010

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Applied and Environmental Microbiology

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

76

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

13

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

4337-4345

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Repetitive element (REP)-polymerase chain reaction (PCR) analysis of Escherichia coli isolates from recreational waters of southeastern Lake Huron

1 reference

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Fecal source tracking, the indicator paradigm, and managing water quality

1 reference

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Performance, design, and analysis in microbial source tracking studies

1 reference

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Multilocus sequence typing supports the hypothesis that cow- and human-associated Salmonella isolates represent distinct and overlapping populations

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1 reference

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1 reference

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Probing genomic diversity and evolution of Escherichia coli O157 by single nucleotide polymorphisms

1 reference

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Comparison of seven protocols to identify fecal contamination sources using Escherichia coli

1 reference

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The use of molecular typing for epidemiological surveillance and investigation of endemic nosocomial infections.

1 reference

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1 reference

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5 July 2018

eBURST: inferring patterns of evolutionary descent among clusters of related bacterial genotypes from multilocus sequence typing data

1 reference

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Genetic characterization of Escherichia coli populations from host sources of fecal pollution by using DNA fingerprinting

1 reference

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A PCR assay To discriminate human and ruminant feces on the basis of host differences in Bacteroides-Prevotella genes encoding 16S rRNA

1 reference

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The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

1 reference

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Bacteriophages and indicator bacteria in human and animal faeces.

1 reference

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Numerical index of the discriminatory ability of typing systems: an application of Simpson's index of diversity

1 reference

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Comparison of molecular markers to detect fresh sewage in environmental waters

1 reference

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Evaluation of multiple sewage-associated Bacteroides PCR markers for sewage pollution tracking.

1 reference

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Lack of specificity for PCR assays targeting human Bacteroides 16S rRNA gene: cross-amplification with fish feces.

1 reference

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Source tracking of Escherichia coli by 16S-23S intergenic spacer region denaturing gradient gel electrophoresis (DGGE) of the rrnB ribosomal operon.

1 reference

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16S rRNA-based assays for quantitative detection of universal, human-, cow-, and dog-specific fecal Bacteroidales: a Bayesian approach

1 reference

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Determining sources of fecal bacteria in waterways.

1 reference

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Genotyping of Campylobacter jejuni using seven single-nucleotide polymorphisms in combination with flaA short variable region sequencing.

1 reference

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Methicillin-resistant Staphylococcus aureus genotyping using a small set of polymorphisms

1 reference

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Single-nucleotide polymorphism phylotyping of Escherichia coli

1 reference

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Evidence of septic system failure determined by a bacterial biochemical fingerprinting method.

1 reference

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Sequence-based source tracking of Escherichia coli based on genetic diversity of beta-glucuronidase.

1 reference

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Identification and interrogation of highly informative single nucleotide polymorphism sets defined by bacterial multilocus sequence typing databases.

1 reference

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1 reference

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1 reference

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12 December 2020

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Identifiers

10.1128/AEM.00128-10

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

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