(Q33966880)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21776033%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

title

Active and total microbial communities in forest soil are largely different and highly stratified during decomposition (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21776033%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21776033%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

Martina Stursova

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21776033%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

Jan Kopecký

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21776033%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

Jana Voriskova

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21776033%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

1

Petr Baldrian

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21776033%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

8

Jaroslav Snajdr

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21776033%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

author name string

Tomáš Větrovský

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21776033%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

Lucia Zifčáková

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21776033%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

Jakub Rídl

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21776033%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

Cestmír Vlček

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21776033%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

Vendula Valášková

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21776033%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

publication date

21 July 2011

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21776033%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21776033%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

volume

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21776033%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

issue

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21776033%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

page(s)

248-258

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21776033%20AND%20SRC:MED&resulttype=core&format=json

Rapidly denoising pyrosequencing amplicon reads by exploiting rank-abundance distributions

8 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

454 Pyrosequencing and Sanger sequencing of tropical mycorrhizal fungi provide similar results but reveal substantial methodological biases

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

Genome sequence of the model mushroom Schizophyllum commune

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

Production of ectomycorrhizal mycelium peaks during canopy closure in Norway spruce forests

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

Fungi unearthed: transcripts encoding lignocellulolytic and chitinolytic enzymes in forest soil

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

Termination of belowground C allocation by trees alters soil fungal and bacterial communities in a boreal forest

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

A comprehensive survey of soil acidobacterial diversity using pyrosequencing and clone library analyses

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

Characterization of denitrification gene clusters of soil bacteria via a metagenomic approach.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

Evaluation of the bacterial diversity in the feces of cattle using 16S rDNA bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP).

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

Simultaneous assessment of soil microbial community structure and function through analysis of the meta-transcriptome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

Isolation of fungal cellobiohydrolase I genes from sporocarps and forest soils by PCR

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

Soil eukaryotic functional diversity, a metatranscriptomic approach

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

Pyrosequencing enumerates and contrasts soil microbial diversity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

Testing the functional significance of microbial composition in natural communities.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

A pyrosequencing-tailored nucleotide barcode design unveils opportunities for large-scale sample multiplexing

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

Metagenomic and small-subunit rRNA analyses reveal the genetic diversity of bacteria, archaea, fungi, and viruses in soil

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

Spatial separation of litter decomposition and mycorrhizal nitrogen uptake in a boreal forest

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

Fungal community analysis by large-scale sequencing of environmental samples

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

A large carbon sink in the woody biomass of Northern forests

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

Phylogenetic identification and in situ detection of individual microbial cells without cultivation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260513

Detection of active soil fungi by RT-PCR amplification of precursor rRNA molecules

28 July 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.95

Comparison of soil fungal/bacterial ratios in a pH gradient using physiological and PLFA-based techniques

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.95

Degradation of cellulose by basidiomycetous fungi

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.95

Biological crusts as a model system for examining the biodiversity–ecosystem function relationship in soils

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.95

Search and clustering orders of magnitude faster than BLAST

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.95

Distantly sampled soils carry few species in common.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.95

The magnitude of fungal diversity: the 1.5 million species estimate revisited

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.95

Disruption of root carbon transport into forest humus stimulates fungal opportunists at the expense of mycorrhizal fungi

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.95

Microbial communities and their relevance for ecosystem models: Decomposition as a case study

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.95

Soil bacterial and fungal communities across a pH gradient in an arable soil.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.95

Testing the functional significance of microbial community composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.95

Structure of the 16 S ribosomal RNA of the thermophilic cyanobacterium Chlorogloeopsis HTF ('Mastigocladus laminosus HTF') strain PCC7518, and phylogenetic analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.95

A molecular method to evaluate basidiomycete laccase gene expression in forest soils

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.95

Areal activities and stratification of hydrolytic enzymes involved in the biochemical cycles of carbon, nitrogen, sulphur and phosphorus in podsolized boreal forest soils

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.95

Saprotrophic basidiomycete mycelia and their interspecific interactions affect the spatial distribution of extracellular enzymes in soil

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21776033

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Ectomycorrhizal community structure varies among Norway spruce (Picea abies) clones

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21776033

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Fungal-to-bacterial ratios in soils investigated for enhanced C sequestration

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.95

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/ISMEJ.2011.95

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21776033%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

8 February 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21776033%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

PubMed publication ID

21776033

1 reference