(Q34033489)

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Comparative genome analysis of three eukaryotic parasites with differing abilities to transform leukocytes reveals key mediators of Theileria-induced leukocyte transformation

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Europe PubMed Central

PubMed publication ID

30 July 2017

Comparative genome analysis of three eukaryotic parasites with differing abilities to transform leukocytes reveals key mediators of Theileria-induced leukocyte transformation (English)

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30 July 2017

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30 July 2017

Shuichi Kawashima

object named as

Shuichi Kawashima

9

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Kimihito Ito

20

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Brian Shiels

27

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Tadashi Imanishi

object named as

Tadashi Imanishi

23

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Takashi Gojobori

21

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Takashi Gojobori

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30 July 2017

Vishvanath Nene

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Vishvanath Nene

29

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object named as

William Weir

24

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Chisato Yamasaki

4

object named as

Chisato Yamasaki

1 reference

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30 July 2017

Chihiro Sugimoto

30

object named as

Chihiro Sugimoto

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30 July 2017

author name string

Kyoko Hayashida

1

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30 July 2017

Yuichiro Hara

2

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30 July 2017

Takashi Abe

3

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30 July 2017

Atsushi Toyoda

5

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30 July 2017

Takehide Kosuge

6

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30 July 2017

Yutaka Suzuki

7

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30 July 2017

Yoshiharu Sato

8

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30 July 2017

Toshiaki Katayama

10

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30 July 2017

Hiroyuki Wakaguri

11

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30 July 2017

Noboru Inoue

12

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30 July 2017

Keiichi Homma

13

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30 July 2017

Masahito Tada-Umezaki

14

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30 July 2017

Yukio Yagi

15

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30 July 2017

Yasuyuki Fujii

16

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30 July 2017

Takuya Habara

17

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30 July 2017

Minoru Kanehisa

18

1 reference

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30 July 2017

Hidemi Watanabe

19

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30 July 2017

Hideaki Sugawara

22

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30 July 2017

Malcolm Gardner

25

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30 July 2017

Masahira Hattori

28

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30 July 2017

publication date

4 September 2012

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30 July 2017

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30 July 2017

3

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30 July 2017

5

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30 July 2017

e00204-12

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Extensive polymorphism and evidence of immune selection in a highly dominant antigen recognized by bovine CD8 T cells specific for Theileria annulata

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Divergence of the mitochondrial genome structure in the apicomplexan parasites, Babesia and Theileria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

KEGG for representation and analysis of molecular networks involving diseases and drugs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Highly syntenic and yet divergent: a tale of two Theilerias

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Expression analysis of the Theileria parva subtelomere-encoded variable secreted protein gene family.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Rfam: updates to the RNA families database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

InterPro: the integrative protein signature database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Characterization of the fine specificity of bovine CD8 T-cell responses to defined antigens from the protozoan parasite Theileria parva

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

MaxAlign: maximizing usable data in an alignment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Locating proteins in the cell using TargetP, SignalP and related tools

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

TACT: Transcriptome Auto-annotation Conducting Tool of H-InvDB.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Theileria parva candidate vaccine antigens recognized by immune bovine cytotoxic T lymphocytes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Gene identification in novel eukaryotic genomes by self-training algorithm

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Alteration of host cell phenotype by Theileria annulata and Theileria parva: mining for manipulators in the parasite genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Investigation of protein functions through data-mining on integrated human transcriptome database, H-Invitational database (H-InvDB).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

JIGSAW: integration of multiple sources of evidence for gene prediction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Genome Sequence of Theileria parva, a Bovine Pathogen That Transforms Lymphocytes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Genome of the Host-Cell Transforming Parasite Theileria annulata Compared with T. parva

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

ACT: the Artemis Comparison Tool

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

MAFFT version 5: improvement in accuracy of multiple sequence alignment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

GeneWise and Genomewise

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Integrative annotation of 21,037 human genes validated by full-length cDNA clones

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

A Theileria annulata DNA binding protein localized to the host cell nucleus alters the phenotype of a bovine macrophage cell line

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Exploration, normalization, and summaries of high density oligonucleotide array probe level data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Cell invasion by Theileria sporozoites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Characterisation of a cluster of genes encoding Theileria annulata AT hook DNA-binding proteins and evidence for localisation to the host cell nucleus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

A study of the systematics of Theileria spp. based upon small-subunit ribosomal RNA gene sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Evidence for localisation of a Theileria parasite AT hook DNA-binding protein to the nucleus of immortalised bovine host cells.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Short-insert libraries as a method of problem solving in genome sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

A novel method for making nested deletions and its application for sequencing of a 300 kb region of human APP locus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Adoptive transfer of immunity to Theileria parva in the CD8+ fraction of responding efferent lymph

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Control of tropical theileriosis (Theileria annulata infection) of cattle.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

An unusual repetitive gene family in Theileria parva which is stage-specifically transcribed

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Disruption of synchrony between parasite growth and host cell division is a determinant of differentiation to the merozoite in Theileria annulata.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

5 July 2018

Emergence of new types of Theileria orientalis in Australian cattle and possible cause of theileriosis outbreaks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

29 October 2018

The taxonomy of the bovine Theileria spp.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

29 October 2018

TigrScan and GlimmerHMM: two open source ab initio eukaryotic gene-finders.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

29 October 2018

A 32 kDa surface antigen of Theileria parva: characterization and immunization studies.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

29 October 2018

Phylogeny of benign Theileria species from cattle in Thailand, China and the U.S.A. based on the major piroplasm surface protein and small subunit ribosomal RNA genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

29 October 2018

Theileria parasite infection in East Asia and control of the disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

29 October 2018

EST_GENOME: a program to align spliced DNA sequences to unspliced genomic DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

29 October 2018

Theileria orientalis, a cosmopolitan blood parasite of cattle: demonstration of the schizont stage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445966

29 October 2018

Population dynamics of Theileria sergenti in persistently infected cattle and vector ticks analysed by a polymerase chain reaction

1 reference

https://pubmed.ncbi.nlm.nih.gov/22951932

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative growth of bovine lymphosarcoma cells and lymphoid cells infected with Theileria parva in athymic (nude) mice

1 reference

https://pubmed.ncbi.nlm.nih.gov/22951932

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Theileria sergenti Infection in Dairy Cattle

1 reference

https://pubmed.ncbi.nlm.nih.gov/22951932

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Histological observations on the schizonts in cattle infected with Japanese Theileria sergenti

1 reference

https://pubmed.ncbi.nlm.nih.gov/22951932

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Theileria sergenti

1 reference

https://pubmed.ncbi.nlm.nih.gov/22951932

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Infection and Transformation of Bovine Lymphoid Cells in vitro by Infective Particles of Theileria parva

1 reference

https://pubmed.ncbi.nlm.nih.gov/22951932

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A genetic analysis of mixed population in Theileria sergenti stocks and isolates using allele-specific polymerase chain reaction

1 reference

https://pubmed.ncbi.nlm.nih.gov/22951932

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Redescription of Babesia equi Laveran, 1901 as Theileria equi Mehlhorn, Schein 1998

1 reference

https://pubmed.ncbi.nlm.nih.gov/22951932

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Isolation of Theileria sergenti piroplasms from infected erythrocytes and development of an enzyme-linked immunosorbent assay for serodiagnosis of T sergenti infections

1 reference

https://pubmed.ncbi.nlm.nih.gov/22951932

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/MBIO.00204-12

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

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