(Q34038598)

30 July 2017

title

jTraML: an open source Java API for TraML, the PSI standard for sharing SRM transitions (English)

1 reference

30 July 2017

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Kenny Helsens

1

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Lennart Martens

object named as

Lennart Martens

series ordinal

5

0 references

Eric W Deutsch

series ordinal

3

object named as

Eric Deutsch

1 reference

30 July 2017

Mi-Youn Brusniak

2

1 reference

30 July 2017

Robert L Moritz

series ordinal

4

1 reference

30 July 2017

publication date

13 October 2011

1 reference

Journal of Proteome Research

30 July 2017

published in

1 reference

30 July 2017

volume

10

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30 July 2017

issue

11

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30 July 2017

page(s)

5260-5263

1 reference

TraML--a standard format for exchange of selected reaction monitoring transition lists

30 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3208355

mProphet: automated data processing and statistical validation for large-scale SRM experiments

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3208355

ATAQS: A computational software tool for high throughput transition optimization and validation for selected reaction monitoring mass spectrometry

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3208355

A global analysis of peptide fragmentation variability

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3208355

Proteomics data repositories: providing a safe haven for your data and acting as a springboard for further research

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3208355

The Ontology Lookup Service: bigger and better

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3208355

High-throughput generation of selected reaction-monitoring assays for proteins and proteomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3208355

The PSI semantic validator: a framework to check MIAPE compliance of proteomics data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3208355

Multiple reaction monitoring-based, multiplexed, absolute quantitation of 45 proteins in human plasma

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3208355

Expediting the development of targeted SRM assays: using data from shotgun proteomics to automate method development

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3208355

A database of mass spectrometric assays for the yeast proteome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3208355

Selected reaction monitoring for quantitative proteomics: a tutorial

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3208355

5 July 2018

The PeptideAtlas project

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3208355

Quantitative mass spectrometric multiple reaction monitoring assays for major plasma proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3208355

PRIDE: the proteomics identifications database

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3208355

LC-MS/MS systematic toxicological analysis: comparison of MS/MS spectra obtained with different instruments and settings

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3208355

Mass spectrometry in high-throughput proteomics: ready for the big time.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3208355

Analysis of the experimental detection of central nervous system-related genes in human brain and cerebrospinal fluid datasets

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3208355

High sensitivity detection of plasma proteins by multiple reaction monitoring of N-glycosites

29 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21967198

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1021/PR200664H

1 reference

30 July 2017

1 reference

30 July 2017

1 reference