(Q34040940)

30 July 2017

title

Mechanisms and principles of homology search during recombination (English)

1 reference

30 July 2017

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24824069%20AND%20SRC:MED&resulttype=core&format=json

3 June 2020

author name string

Claudio A Lademann

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24824069%20AND%20SRC:MED&resulttype=core&format=json

3 June 2020

Stefan Jentsch

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24824069%20AND%20SRC:MED&resulttype=core&format=json

3 June 2020

language of work or name

1 reference

14 May 2014

1 reference

Nature Reviews Molecular Cell Biology

30 July 2017

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24824069%20AND%20SRC:MED&resulttype=core&format=json

3 June 2020

volume

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24824069%20AND%20SRC:MED&resulttype=core&format=json

3 June 2020

issue

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24824069%20AND%20SRC:MED&resulttype=core&format=json

3 June 2020

page(s)

369-383

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24824069%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1038/nrm3805

3 June 2020

exact match

0 references

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DNA in motion during double-strand break repair

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Double-strand break end resection and repair pathway choice

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Rad51 is an accessory factor for Dmc1-mediated joint molecule formation during meiosis

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The specificity of the secondary DNA binding site of RecA protein defines its role in DNA strand exchange

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The function of the secondary DNA-binding site of RecA protein during DNA strand exchange

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Mechanism of homology recognition in DNA recombination from dual-molecule experiments

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Synaptic complex revisited; a homologous recombinase flips and switches bases

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Exchange of DNA base pairs that coincides with recognition of homology promoted by E. coli RecA protein

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RecA-mediated homology search as a nearly optimal signal detection system

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The differential extension in dsDNA bound to Rad51 filaments may play important roles in homology recognition and strand exchange.

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RecA homology search is promoted by mechanical stress along the scanned duplex DNA.

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Stable DNA heteroduplex formation catalyzed by the Escherichia coli RecA protein in the absence of ATP hydrolysis

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Complementary strand relocation may play vital roles in RecA-based homology recognition

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Real-time observation of strand exchange reaction with high spatiotemporal resolution

21 January 2018

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Regulation of DNA strand exchange in homologous recombination

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By searching processively RecA protein pairs DNA molecules that share a limited stretch of homology.

21 January 2018

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Diffusion-driven mechanisms of protein translocation on nucleic acids. 1. Models and theory.

21 January 2018

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An end to 40 years of mistakes in DNA-protein association kinetics?

21 January 2018

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RecA filament sliding on DNA facilitates homology search

21 January 2018

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Homologous recombination in real time: DNA strand exchange by RecA.

21 January 2018

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Single-molecule imaging of DNA pairing by RecA reveals a three-dimensional homology search

21 January 2018

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Break dosage, cell cycle stage and DNA replication influence DNA double strand break response

21 January 2018

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Mechanism of eukaryotic homologous recombination

21 January 2018

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21 January 2018

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The hidden talents of SPO11.

21 January 2018

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Cohesin: its roles and mechanisms

21 January 2018

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Genome-wide mapping of the cohesin complex in the yeast Saccharomyces cerevisiae

21 January 2018

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Chromosomal addresses of the cohesin component Mcd1p

21 January 2018

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Dynamic imaging of genomic loci in living human cells by an optimized CRISPR/Cas system

21 January 2018

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Competitive repair by naturally dispersed repetitive DNA during non-allelic homologous recombination

21 January 2018

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Double-strand breaks associated with repetitive DNA can reshape the genome

21 January 2018

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Recombination between retrotransposons as a source of chromosome rearrangements in the yeast Saccharomyces cerevisiae

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Transpositions and translocations induced by site-specific double-strand breaks in budding yeast.

21 January 2018

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Effect of nuclear architecture on the efficiency of double-strand break repair

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Saccharomyces cerevisiae donor preference during mating-type switching is dependent on chromosome architecture and organization

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Molecular dissection of mitotic recombination in the yeast Saccharomyces cerevisiae

21 January 2018

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Collisions between yeast chromosomal loci in vivo are governed by three layers of organization

21 January 2018

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Homology search and choice of homologous partner during mitotic recombination

21 January 2018

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Lack of chromosome territoriality in yeast: promiscuous rejoining of broken chromosome ends.

21 January 2018

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In vivo roles of Rad52, Rad54, and Rad55 proteins in Rad51-mediated recombination.

21 January 2018

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The emerging role of nuclear architecture in DNA repair and genome maintenance

21 January 2018

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The cellular etiology of chromosome translocations.

21 January 2018

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The origin of recurrent translocations in recombining lymphocytes: a balance between break frequency and nuclear proximity.

21 January 2018

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Spatial dynamics of chromosome translocations in living cells.

21 January 2018

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Spatial organization of the mouse genome and its role in recurrent chromosomal translocations

21 January 2018

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Close proximity to Igh is a contributing factor to AID-mediated translocations.

21 January 2018

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Genome-wide translocation sequencing reveals mechanisms of chromosome breaks and rearrangements in B cells

21 January 2018

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Translocation-capture sequencing reveals the extent and nature of chromosomal rearrangements in B lymphocytes

21 January 2018

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Analysis of repair mechanism choice during homologous recombination

21 January 2018

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A three-dimensional model of the yeast genome

21 January 2018

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Mating-type gene switching in Saccharomyces cerevisiae

21 January 2018

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Monitoring DNA recombination initiated by HO endonuclease.

21 January 2018

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Regulation of budding yeast mating-type switching donor preference by the FHA domain of Fkh1

21 January 2018

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Principles of chromosomal organization: lessons from yeast

21 January 2018

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How to build a yeast nucleus.

21 January 2018

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Increased mobility of double-strand breaks requires Mec1, Rad9 and the homologous recombination machinery.

21 January 2018

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Checkpoint kinases and the INO80 nucleosome remodeling complex enhance global chromatin mobility in response to DNA damage.

21 January 2018

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Cohesin and the nucleolus constrain the mobility of spontaneous repair foci

21 January 2018

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Targeted INO80 enhances subnuclear chromatin movement and ectopic homologous recombination

21 January 2018

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Chromatin and the genome integrity network.

21 January 2018

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RecA bundles mediate homology pairing between distant sisters during DNA break repair.

21 January 2018

1 reference

Functions of the Snf2/Swi2 family Rad54 motor protein in homologous recombination

21 January 2018

1 reference

Rad54 protein is targeted to pairing loci by the Rad51 nucleoprotein filament

21 January 2018

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Catalysis of homologous DNA pairing by yeast Rad51 and Rad54 proteins

21 January 2018

1 reference

Visualization of Rad54, a chromatin remodeling protein, translocating on single DNA molecules

21 January 2018

1 reference

Rad54 protein possesses chromatin-remodeling activity stimulated by the Rad51-ssDNA nucleoprotein filament

21 January 2018

1 reference

Rad54p is a chromatin remodeling enzyme required for heteroduplex DNA joint formation with chromatin

21 January 2018

1 reference

Promotion of Rad51-dependent D-loop formation by yeast recombination factor Rdh54/Tid1.

21 January 2018

1 reference

A DNA-translocating Snf2 molecular motor: Saccharomyces cerevisiae Rdh54 displays processive translocation and extrudes DNA loops.

21 January 2018

1 reference

Single molecule imaging of Tid1/Rdh54, a Rad54 homolog that translocates on duplex DNA and can disrupt joint molecules.

21 January 2018

1 reference

ATP-dependent chromatin remodeling by the Saccharomyces cerevisiae homologous recombination factor Rdh54.

21 January 2018

1 reference

Mechanism of RecA-mediated homologous recombination revisited by single molecule nanomanipulation.

21 January 2018

1 reference

A Rad51 presynaptic filament is sufficient to capture nucleosomal homology during recombinational repair of a DNA double-strand break

21 January 2018

1 reference

ATP-dependent and ATP-independent roles for the Rad54 chromatin remodeling enzyme during recombinational repair of a DNA double strand break

21 January 2018

1 reference

Real-time analysis of double-strand DNA break repair by homologous recombination

21 January 2018

1 reference

Rad54 functions as a heteroduplex DNA pump modulated by its DNA substrates and Rad51 during D loop formation

21 January 2018

1 reference

Recombinational repair within heterochromatin requires ATP-dependent chromatin remodeling

21 January 2018

1 reference

Chromatin modifications and chromatin remodeling during DNA repair in budding yeast

21 January 2018

1 reference

INO80-dependent chromatin remodeling regulates early and late stages of mitotic homologous recombination

21 January 2018

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Distinct roles for the RSC and Swi/Snf ATP-dependent chromatin remodelers in DNA double-strand break repair

21 January 2018

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High-resolution profiling of gammaH2AX around DNA double strand breaks in the mammalian genome.

21 January 2018

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Postreplicative recruitment of cohesin to double-strand breaks is required for DNA repair.

21 January 2018

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γH2AX spreading linked to homology search.

21 January 2018

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Dynamics of yeast histone H2A and H2B phosphorylation in response to a double-strand break

21 January 2018

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At the heart of the chromosome: SMC proteins in action

21 January 2018

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CTCF and cohesin: linking gene regulatory elements with their targets

21 January 2018

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Sister chromatid cohesion is required for postreplicative double-strand break repair in Saccharomyces cerevisiae.

21 January 2018

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DNA double-strand breaks trigger genome-wide sister-chromatid cohesion through Eco1 (Ctf7).

21 January 2018

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Scc1/Rad21/Mcd1 is required for sister chromatid cohesion and kinetochore function in vertebrate cells

21 January 2018

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DNA damage response pathway uses histone modification to assemble a double-strand break-specific cohesin domain

21 January 2018

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Smc5-Smc6 mediate DNA double-strand-break repair by promoting sister-chromatid recombination.

21 January 2018

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Human SMC5/6 complex promotes sister chromatid homologous recombination by recruiting the SMC1/3 cohesin complex to double-strand breaks

21 January 2018

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Cohesin Is limiting for the suppression of DNA damage-induced recombination between homologous chromosomes

21 January 2018

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Dynamics of homology searching during gene conversion in Saccharomyces cerevisiae revealed by donor competition.

21 January 2018

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The hierarchy of the 3D genome

21 January 2018

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Double-strand break repair by interchromosomal recombination: an in vivo repair mechanism utilized by multiple somatic tissues in mammals

21 January 2018

1 reference

Double-strand breaks in heterochromatin move outside of a dynamic HP1a domain to complete recombinational repair.

21 January 2018

1 reference

DNA double-strand breaks in heterochromatin elicit fast repair protein recruitment, histone H2AX phosphorylation and relocation to euchromatin

21 January 2018

1 reference

Heterochromatin is refractory to gamma-H2AX modification in yeast and mammals

21 January 2018

1 reference

The Smc5-Smc6 complex and SUMO modification of Rad52 regulates recombinational repair at the ribosomal gene locus.

21 January 2018

1 reference

Characterization of RAD51-independent break-induced replication that acts preferentially with short homologous sequences

21 January 2018

1 reference

Homologous recombination in hybridoma cells: dependence on time and fragment length

21 January 2018

1 reference

The length of homology required for gene targeting in embryonic stem cells

21 January 2018

1 reference

Srs2 and Sgs1-Top3 suppress crossovers during double-strand break repair in yeast

21 January 2018

1 reference

Functional targeting of DNA damage to a nuclear pore-associated SUMO-dependent ubiquitin ligase

21 January 2018

1 reference

Chromosome-wide Rad51 spreading and SUMO-H2A.Z-dependent chromosome fixation in response to a persistent DNA double-strand break

21 January 2018

1 reference

Mechanisms that regulate localization of a DNA double-strand break to the nuclear periphery

21 January 2018

1 reference

Mechanisms of programmed DNA lesions and genomic instability in the immune system.

21 January 2018

1 reference

Recombination centres and the orchestration of V(D)J recombination

21 January 2018

1 reference

Genetics of Borrelia burgdorferi

21 January 2018

1 reference

Focusing homologous recombination: pilin antigenic variation in the pathogenic Neisseria

21 January 2018

1 reference

Antigenic variation in African trypanosomes: the importance of chromosomal and nuclear context in VSG expression control

21 January 2018

1 reference

Silence, activate, poise and switch! Mechanisms of antigenic variation in Plasmodium falciparum.

21 January 2018

1 reference

Repetitive sequences in complex genomes: structure and evolution

21 January 2018

1 reference

The MRE11 complex: starting from the ends.

21 January 2018

1 reference

In vitro assays for DNA pairing and recombination-associated DNA synthesis

21 January 2018

1 reference

Kinetic analysis of pairing and strand exchange catalyzed by RecA. Detection by fluorescence energy transfer.

21 January 2018

1 reference

Caught in the act: the lifetime of synaptic intermediates during the search for homology on DNA.

21 January 2018

1 reference

Single-molecule imaging brings Rad51 nucleoprotein filaments into focus

21 January 2018

1 reference

Introduction of double-strand breaks into the genome of mouse cells by expression of a rare-cutting endonuclease

21 January 2018

1 reference

Two different types of double-strand breaks in Saccharomyces cerevisiae are repaired by similar RAD52-independent, nonhomologous recombination events

21 January 2018

1 reference

Genome architecture: domain organization of interphase chromosomes

21 January 2018

1 reference

Nuclear organization in the nematode C. elegans

21 January 2018

1 reference

Organization and segregation of bacterial chromosomes

21 January 2018

1 reference

Yeast chromosomal interactions and nuclear architecture

21 January 2018

1 reference

Advancing our understanding of functional genome organisation through studies in the fission yeast

21 January 2018

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21 January 2018

Chromosome territories

1 reference

Chromosome territories, nuclear architecture and gene regulation in mammalian cells

21 January 2018

1 reference

A guide to super-resolution fluorescence microscopy

21 January 2018

1 reference

Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data

21 January 2018

1 reference

Genomics tools for unraveling chromosome architecture

21 January 2018

1 reference

Functional implications of genome topology.

21 January 2018

1 reference

Nuclear organization: taking a position on gene expression.

21 January 2018

1 reference

Gene regulation through nuclear organization.

21 January 2018

1 reference

Nuclear organization of the genome and the potential for gene regulation

21 January 2018

1 reference

High-resolution statistical mapping reveals gene territories in live yeast

21 January 2018

1 reference

Chromosome looping in yeast: telomere pairing and coordinated movement reflect anchoring efficiency and territorial organization

21 January 2018

1 reference

Physical tethering and volume exclusion determine higher-order genome organization in budding yeast

21 January 2018

1 reference

A 700 bp cis-Acting Region Controls Mating-Type Dependent Recombination Along the Entire Left Arm of Yeast Chromosome III

21 January 2018

1 reference

A Predictive Computational Model of the Dynamic 3D Interphase Yeast Nucleus

21 January 2018

1 reference

Recombinational DNA repair in a cellular context: a search for the homology search

21 January 2018

1 reference

Yeast Rad51 recombinase mediates polar DNA strand exchange in the absence of ATP hydrolysis

31 March 2020

1 reference

Biochemistry of Genetic Recombination: Energetics and Mechanism of DNA Strand Exchange

31 March 2020

1 reference

No sliding during homology search by RecA protein

31 March 2020

1 reference

Monitoring homology search during DNA double-strand break repair in vivo

31 March 2020

1 reference

DNA damage defines sites of recurrent chromosomal translocations in B lymphocytes

31 March 2020

1 reference

Spatial proximity of translocation-prone gene loci in human lymphomas

31 March 2020

1 reference

MATa donor preference in yeast mating-type switching: activation of a large chromosomal region for recombination

31 March 2020

1 reference

Increased chromosome mobility facilitates homology search during recombination

31 March 2020

2 references

31 March 2020

12 December 2020

Homology-driven chromatin remodeling by human RAD54

1 reference

Superhelicity-driven homologous DNA pairing by yeast recombination factors Rad51 and Rad54

31 March 2020

1 reference

DNA repair choice defines a common pathway for recruitment of chromatin regulators

31 March 2020

1 reference

Postreplicative Formation of Cohesion Is Required for Repair and Induced by a Single DNA Break

31 March 2020

2 references

31 March 2020

12 December 2020

Nascent DNA synthesis during homologous recombination is synergistically promoted by the rad51 recombinase and DNA homology

1 reference

The efficiency of meiotic recombination between dispersed sequences in Saccharomyces cerevisiae depends upon their chromosomal location.

31 March 2020

1 reference

12 December 2020

Position effects in ectopic and allelic mitotic recombination in Saccharomyces cerevisiae

1 reference

12 December 2020

Centromere clustering is a major determinant of yeast interphase nuclear organization

1 reference

12 December 2020

Intermediates of recombination during mating type switching in Saccharomyces cerevisiae

1 reference

12 December 2020

Homologous recombination in Escherichia coli: dependence on substrate length and homology

1 reference

12 December 2020

On the mechanism of pairing of single- and double-stranded DNA molecules by the recA and single-stranded DNA-binding proteins of Escherichia coli.

1 reference

12 December 2020