(Q34043297)

30 July 2017

Reprogramming of Escherichia coli K-12 metabolism during the initial phase of transition from an anaerobic to a micro-aerobic environment (English)

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30 July 2017

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2

Matthew D Rolfe

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Andrea M Hounslow

3

object named as

Andrea M Hounslow

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30 July 2017

Eleanor W Trotter

1

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30 July 2017

C Jeremy Craven

4

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30 July 2017

Michael P Williamson

5

1 reference

30 July 2017

Guido Sanguinetti

6

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30 July 2017

Robert K Poole

7

1 reference

30 July 2017

Jeffrey Green

8

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30 July 2017

language of work or name

English

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publication date

27 September 2011

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30 July 2017

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30 July 2017

6

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30 July 2017

9

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30 July 2017

e25501

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Creative Commons Attribution 4.0 International

30 July 2017

start time

27 September 2011

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

Transcript profiling and inference of Escherichia coli K-12 ArcA activity across the range of physiologically relevant oxygen concentrations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3181329

PdhR (pyruvate dehydrogenase complex regulator) controls the respiratory electron transport system in Escherichia coli

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3181329

Genome-wide expression analysis indicates that FNR of Escherichia coli K-12 regulates a large number of genes of unknown function

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3181329

28 July 2018

Bacterial redox sensors.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3181329

Integrating high-throughput and computational data elucidates bacterial networks

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3181329

Global gene expression profiling in Escherichia coli K12. The effects of oxygen availability and FNR.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3181329

Quantitative assessment of oxygen availability: perceived aerobiosis and its effect on flux distribution in the respiratory chain of Escherichia coli

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3181329

The aerobic/anaerobic interface

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3181329

Alternative respiratory pathways of Escherichia coli: energetics and transcriptional regulation in response to electron acceptors

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3181329

Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3181329

Expression of the Escherichia coli yfiD gene responds to intracellular pH and reduces the accumulation of acidic metabolic end products

28 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025501

Escherichia coli transcriptome dynamics during the transition from anaerobic to aerobic conditions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025501

YfiD of Escherichia coli and Y06I of bacteriophage T4 as autonomous glycyl radical cofactors reconstituting the catalytic center of oxygen-fragmented pyruvate formate-lyase

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025501

EcoCyc: a comprehensive view of Escherichia coli biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025501

Genome-derived minimal metabolic models for Escherichia coli MG1655 with estimated in vivo respiratory ATP stoichiometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025501

TFInfer: a tool for probabilistic inference of transcription factor activities

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025501

Transition of Escherichia coli from aerobic to micro-aerobic conditions involves fast and slow reacting regulatory components.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025501

Aerobic activation of transcription of the anaerobically inducible Escherichia coli focA-pfl operon by fumarate nitrate regulator

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0025501

A novel promoter architecture for microaerobic activation by the anaerobic transcription factor FNR

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21980479

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Ultrastructure and pyruvate formate-lyase radical quenching property of the multienzymic AdhE protein of Escherichia coli

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21980479

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Purification, characterization and mode of action of PdhR, the transcriptional repressor of the pdhR-aceEF-lpd operon of Escherichia coli

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21980479

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0025501

1 reference

30 July 2017

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1 reference

30 July 2017

1 reference