(Q34044203)

30 July 2017

DNA transposons have colonized the genome of the giant virus Pandoravirus salinus (English)

1 reference

30 July 2017

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26067596%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

Zhiqiang Wu

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26067596%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

2

Cédric Feschotte

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26067596%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

author name string

Rachel Lockridge Mueller

series ordinal

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26067596%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

publication date

12 June 2015

1 reference

30 July 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26067596%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

volume

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26067596%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

page(s)

38

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26067596%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1186/s12915-015-0145-1

13 June 2020

exact match

0 references

cites work

Evolution of double-stranded DNA viruses of eukaryotes: from bacteriophages to transposons to giant viruses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Cellular domains and viral lineages

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Origin of giant viruses from smaller DNA viruses not from a fourth domain of cellular life

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Genome of brown tide virus (AaV), the little giant of the Megaviridae, elucidates NCLDV genome expansion and host-virus coevolution

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Revisiting the genome packaging in viruses with lessons from the "Giants".

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Thirty-thousand-year-old distant relative of giant icosahedral DNA viruses with a pandoravirus morphology

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

The contributions of transposable elements to the structure, function, and evolution of plant genomes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Population genomics supports baculoviruses as vectors of horizontal transfer of insect transposons

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Dicer-like 3 produces transposable element-associated 24-nt siRNAs that control agricultural traits in rice

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Miniature inverted-repeat transposable elements: discovery, distribution, and activity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Pandoraviruses are highly derived phycodnaviruses

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Route of NCLDV evolution: the genomic accordion

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Pandoraviruses: amoeba viruses with genomes up to 2.5 Mb reaching that of parasitic eukaryotes.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

"Megavirales", a proposed new order for eukaryotic nucleocytoplasmic large DNA viruses

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Complete genome sequence of invertebrate iridescent virus 22 isolated from a blackfly larva

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Genome of Phaeocystis globosa virus PgV-16T highlights the common ancestry of the largest known DNA viruses infecting eukaryotes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Horizontal transfer and evolution of prokaryote transposable elements in eukaryotes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Viral evolution: Primordial cellular origins and late adaptation to parasitism

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Lateral gene exchanges shape the genomes of amoeba-resisting microorganisms

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Reclassification of giant viruses composing a fourth domain of life in the new order Megavirales

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Genomics of Megavirus and the elusive fourth domain of Life

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Recurrent horizontal transfer of bacterial toxin genes to eukaryotes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Dynamic interactions between transposable elements and their hosts

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Informational gene phylogenies do not support a fourth domain of life for nucleocytoplasmic large DNA viruses

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

The catalytic domain of all eukaryotic cut-and-paste transposase superfamilies

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Transfer of a chromosomal Maverick to endogenous bracovirus in a parasitoid wasp.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Phylogenetic and phyletic studies of informational genes in genomes highlight existence of a 4 domain of life including giant viruses

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Pervasive horizontal transfer of rolling-circle transposons among animals

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Giant viruses: conflicts in revisiting the virus concept

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Gene exchange and the origin of giant viruses

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Phantom, a new subclass of Mutator DNA transposons found in insect viruses and widely distributed in animals

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Genome analysis of microorganisms living in amoebae reveals a melting pot of evolution

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Integrating prokaryotes and eukaryotes: DNA transposases in light of structure.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Giant Marseillevirus highlights the role of amoebae as a melting pot in emergence of chimeric microorganisms

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Upcoming challenges for multiple sequence alignment methods in the high-throughput era

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Identification of miniature inverted-repeat transposable elements (MITEs) and biogenesis of their siRNAs in the Solanaceae: new functional implications for MITEs

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Horizontal gene transfer in eukaryotic evolution

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Small mobile sequences in bacteria display diverse structure/function motifs.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Poxviruses as possible vectors for horizontal transfer of retroposons from reptiles to mammals

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Insertion sequence diversity in archaea

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Sequence and annotation of the 369-kb NY-2A and the 345-kb AR158 viruses that infect Chlorella NC64A.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Acquisition of Host Cell DNA Sequences by Baculoviruses: Relationship Between Host DNA Insertions and FP Mutants of Autographa californica and Galleria mellonella Nuclear Polyhedrosis Viruses

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Mimivirus and the emerging concept of "giant" virus

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

DNA-binding specificity of rice mariner-like transposases and interactions with Stowaway MITEs

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Virology: Gulliver among the Lilliputians

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

A new example of viral intein in Mimivirus

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

The 1.2-megabase genome sequence of Mimivirus

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

A potentially functional mariner transposable element in the protist Trichomonas vaginalis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Transposable Elements in Filamentous Fungi

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Mfold web server for nucleic acid folding and hybridization prediction

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Genome-wide analysis of mariner-like transposable elements in rice reveals complex relationships with stowaway miniature inverted repeat transposable elements (MITEs)

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Mariner-like transposases are widespread and diverse in flowering plants

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

The PSIPRED protein structure prediction server

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Resident aliens: the Tc1/mariner superfamily of transposable elements

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

LTR-retrotransposons and MITEs: important players in the evolution of plant genomes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

TCl4.7: a novel lepidopteran transposon found in Cydia pomonella granulosis virus

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Tourist: a large family of small inverted repeat elements frequently associated with maize genes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

A unified classification system for eukaryotic transposable elements

28 July 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-015-0145-1

A virus mutant with an insertion of a copia-like transposable element

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-015-0145-1

Provirophages and transpovirons as the diverse mobilome of giant viruses

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-015-0145-1

Convergent mechanisms of genome evolution of large and giant DNA viruses.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-015-0145-1

Bioinformatics and genomic analysis of transposable elements in eukaryotic genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-015-0145-1

Evidence that a family of miniature inverted-repeat transposable elements (MITEs) from the Arabidopsis thaliana genome has arisen from a pogo-like DNA transposon.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-015-0145-1

Transposition of a fungal miniature inverted-repeat transposable element through the action of a Tc1-like transposase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-015-0145-1

The ancient mariner sails again: transposition of the human Hsmar1 element by a reconstructed transposase and activities of the SETMAR protein on transposon ends

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-015-0145-1

Tuned for transposition: molecular determinants underlying the hyperactivity of a Stowaway MITE.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-015-0145-1

Merlin, a new superfamily of DNA transposons identified in diverse animal genomes and related to bacterial IS1016 insertion sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-015-0145-1

21 January 2018

A giant virus in amoebae

1 reference

https://api.crossref.org/works/10.1186%2FS12915-015-0145-1

Polintons: a hotbed of eukaryotic virus, transposon and plasmid evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-015-0145-1

Unexpected diversity and differential success of DNA transposons in four species of entamoeba protozoans.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-015-0145-1

Bacterial insertion sequences: their genomic impact and diversity

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-015-0145-1

Amoeba/amoebal symbiont genetic transfers: lessons from giant virus neighbours

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-015-0145-1

De novo identification of repeat families in large genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-015-0145-1

T-Coffee: A novel method for fast and accurate multiple sequence alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-015-0145-1

Expanding the diversity of the IS630-Tc1-mariner superfamily: discovery of a unique DD37E transposon and reclassification of the DD37D and DD39D transposons

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4495683

Open Questions About Giant Viruses

28 October 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-015-0145-1

Unexpected consequences of a sudden and massive transposon amplification on rice gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-015-0145-1

Editorial introduction to "Giant Viruses" special issue of Virology

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26067596

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Functional evaluation of the role of reticuloendotheliosis virus long terminal repeat (LTR) integrated into the genome of a field strain of Marek's disease virus

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26067596

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

I am what I eat and I eat what I am: acquisition of bacterial genes by giant viruses

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26067596

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/S12915-015-0145-1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26067596%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

13 June 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26067596%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26067596%20AND%20SRC:MED&resulttype=core&format=json