(Q34046731)

30 July 2017

title

Landscape of somatic mutations in 560 breast cancer whole-genome sequences (English)

1 reference

30 July 2017

main subject

whole genome sequencing

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Author Correction: Landscape of somatic mutations in 560 breast cancer whole-genome sequences

inferred from title

corrigendum / erratum

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63

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80

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47

Keiran Raine

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Sarah O'Meara

43

Sarah O'Meara

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Anne Vincent-Salomon

61

Anne Vincent-Salomon

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Anne-Lise Børresen-Dale

84

Anne-Lise Børresen-Dale

1 reference

30 July 2017

Ole Christian Lingjærde

17

Ole Christian Lingjærde

1 reference

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Kamna Ramakrishnan

48

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Sancha Martin

Sancha Martin

9

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Sung-Min Ahn

Sung-Min Ahn

20

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Young Seok Ju

Young Seok Ju

12

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Ludmil B. Alexandrov

Ludmil B Alexandrov

8

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Ville Mustonen

Ville Mustonen

42

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Stian Knappskog

Stian Knappskog

66

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Christine Desmedt

Christine Desmedt

25

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Stefania Tommasi

Stefania Tommasi

57

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David C. Wedge

David C Wedge

10

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Peter T. Simpson

Peter T Simpson

52

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Peter Van Loo

Peter Van Loo

11

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Markus Ringnér

Markus Ringnér

19

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Sunil R Lakhani

Sunil R Lakhani

77

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Paul N Span

Paul N Span

75

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P. Andrew Futreal

73

P Andrew Futreal

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Dominik Glodzik

5

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Anita Langerød

18

Anita Langerød

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46

Colin A Purdie

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30

Moritz Gerstung

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41

Andrew Menzies

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1

Serena Nik-Zainal

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82

Marc J van de Vijver

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15

Sandro Morganella

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56

Jon Teague

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88

Michael R Stratton

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23

Annegien Broeks

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Hendrik Gerard Stunnenberg

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81

Hendrik G Stunnenberg

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33

David R Jones

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54

Lucy Stebbings

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4

Manasa Ramakrishna

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28

Aquila Fatima

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21

Sandrine Boyault

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69

Åke Borg

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85

Andrea L Richardson

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51

Anieta M Sieuwerts

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29

John A Foekens

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78

Jorunn E Eyfjord

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68

Jos Jonkers

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3

Johan Staaf

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6

Xueqing Zou

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7

Inigo Martincorena

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13

Marcel Smid

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14

Arie B Brinkman

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16

Miriam R Aure

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26

Luc Dirix

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27

Serge Dronov

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31

Gerrit K J Hooijer

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34

Hyung-Yong Kim

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35

Tari A King

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Savitri Krishnamurthy

36

Savitri Krishnamurthy

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44

Iris Pauporté

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45

Xavier Pivot

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50

Gilles Romieu

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55

Olafur A Stefansson

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58

Isabelle Treilleux

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Gert G G M Van den Eynden

30 July 2017

59

Gert G Van den Eynden

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67

Benita Kiat Tee Tan

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71

Christos Sotiriou

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72

Alain Viari

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76

Steven Van Laere

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2

Helen Davies

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Jane E Brock

22

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Adam Butler

24

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Se Jin Jang

32

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Hee Jin Lee

37

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Jeong-Yeon Lee

38

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Yilong Li

39

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Stuart McLaren

40

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F Germán Rodríguez-González

49

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Rebecca Shepherd

53

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Peter Vermeulen

60

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Lucy Yates

62

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Laura van't Veer

64

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Andrew Tutt

65

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Naoto T Ueno

70

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Peter J Campbell

74

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Alastair M Thompson

79

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John W M Martens

83

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Gu Kong

86

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Gilles Thomas

87

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30 July 2017

language of work or name

English

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publication date

2 May 2016

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30 July 2017

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30 July 2017

volume

534

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30 July 2017

issue

7605

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30 July 2017

page(s)

47-54

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Somatic structural variation and cancer

30 July 2017

cites work

1 reference

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Whole genomes redefine the mutational landscape of pancreatic cancer

5 July 2018

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Activation of human telomerase reverse transcriptase through gene fusion in clear cell sarcoma of the kidney

5 July 2018

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Genome-wide analysis of noncoding regulatory mutations in cancer

5 July 2018

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The long noncoding RNAs NEAT1 and MALAT1 bind active chromatin sites

5 July 2018

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Mechanisms underlying mutational signatures in human cancers

5 July 2018

1 reference

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Characterization of the genomic features and expressed fusion genes in micropapillary carcinomas of the breast

5 July 2018

1 reference

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Discovery and saturation analysis of cancer genes across 21 tumour types

5 July 2018

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Integrative annotation of variants from 1092 humans: application to cancer genomics

5 July 2018

1 reference

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Signatures of mutational processes in human cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

RCircos: an R package for Circos 2D track plots.

5 July 2018

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Frequency of TERT promoter mutations in human cancers

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Mutational heterogeneity in cancer and the search for new cancer-associated genes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Breakpoint analysis of transcriptional and genomic profiles uncovers novel gene fusions spanning multiple human cancer types

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Identification of targetable FGFR gene fusions in diverse cancers.

5 July 2018

1 reference

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Highly recurrent TERT promoter mutations in human melanoma

5 July 2018

1 reference

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Deciphering signatures of mutational processes operative in human cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Direct and inverted repeats elicit genetic instability by both exploiting and eluding DNA double-strand break repair systems in mycobacteria

5 July 2018

1 reference

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Patterns of genomic loss of heterozygosity predict homologous recombination repair defects in epithelial ovarian cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Comprehensive molecular portraits of human breast tumours

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

An integrated encyclopedia of DNA elements in the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Gene fusions associated with recurrent amplicons represent a class of passenger aberrations in breast cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Ploidy and large-scale genomic instability consistently identify basal-like breast carcinomas with BRCA1/2 inactivation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Sequence analysis of mutations and translocations across breast cancer subtypes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

The landscape of cancer genes and mutational processes in breast cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Whole-genome analysis informs breast cancer response to aromatase inhibition

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Mutational processes molding the genomes of 21 breast cancers

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

The life history of 21 breast cancers

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Telomeric allelic imbalance indicates defective DNA repair and sensitivity to DNA-damaging agents

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

The genomic and transcriptomic architecture of 2,000 breast tumours reveals novel subgroups

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

The clonal and mutational evolution spectrum of primary triple-negative breast cancers

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Functionally recurrent rearrangements of the MAST kinase and Notch gene families in breast cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Whole-genome sequencing identifies recurrent mutations in chronic lymphocytic leukaemia

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Genomic differences between estrogen receptor (ER)-positive and ER-negative human breast carcinoma identified by single nucleotide polymorphism array comparative genome hybridization analysis.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Allele-specific copy number analysis of tumors

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

ConsensusClusterPlus: a class discovery tool with confidence assessments and item tracking

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

A small-cell lung cancer genome with complex signatures of tobacco exposure

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

A comprehensive catalogue of somatic mutations from a human cancer genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Inhibition of poly(ADP-ribose) polymerase in tumors from BRCA mutation carriers

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Fast and accurate short read alignment with Burrows-Wheeler transform

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Amplification-free Illumina sequencing-library preparation facilitates improved mapping and assembly of (G+C)-biased genomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Replication stalling at unstable inverted repeats: interplay between DNA hairpins and fork stabilizing proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Novel patterns of genome rearrangement and their association with survival in breast cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Statistical analysis of pathogenicity of somatic mutations in cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Targeting the DNA repair defect of BRCA tumours

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Genome update: DNA repeats in bacterial genomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Inverted repeats, stem-loops, and cruciforms: significance for initiation of DNA replication

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Interpreting cDNA sequences: some insights from studies on translation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Short Inverted Repeats Are Hotspots for Genetic Instability: Relevance to Cancer Genomes.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Integrated analysis of copy number and loss of heterozygosity in primary breast carcinomas using high-density SNP array.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Extracellular matrix signature identifies breast cancer subgroups with different clinical outcome.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Stratified false discovery control for large-scale hypothesis testing with application to genome-wide association studies

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4910866

Treatment with olaparib in a patient with PTEN-deficient endometrioid endometrial cancer

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27135926

12 December 2020

inferred from PubMed ID database lookup

Inverted repeats, stem-loops, and cruciforms: Significance for initiation of DNA replication

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNATURE17676

7 January 2021

inferred from DOI database lookup

The topography of mutational processes in breast cancer genomes

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNATURE17676

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1038/NATURE17676

1 reference

30 July 2017

1 reference

30 July 2017

1 reference