(Q37211361)

19 August 2017

The topography of mutational processes in breast cancer genomes (English)

1 reference

19 August 2017

1 reference

32

1 reference

19 August 2017

Anne-Lise Børresen-Dale

25

Anne-Lise Børresen-Dale

1 reference

19 August 2017

Sancha Martin

9

0 references

Ludmil B. Alexandrov

Ludmil B Alexandrov

2

0 references

Julian E Sale

Julian Sale

29

0 references

Sunil R Lakhani

Sunil R Lakhani

19

0 references

Paul N Span

Paul N Span

17

0 references

P. Andrew Futreal

15

P Andrew Futreal

1 reference

19 August 2017

Dominik Glodzik

3

0 references

Serena Nik-Zainal

33

Serena Nik-Zainal

1 reference

19 August 2017

23

Marc J van de Vijver

1 reference

19 August 2017

1

Sandro Morganella

1 reference

19 August 2017

31

Michael R Stratton

1 reference

Hendrik Gerard Stunnenberg

19 August 2017

22

Hendrik G Stunnenberg

1 reference

19 August 2017

5

Helen Davies

1 reference

19 August 2017

7

Anieta M Sieuwerts

1 reference

19 August 2017

18

Steven Van Laere

1 reference

19 August 2017

4

Xueqing Zou

1 reference

19 August 2017

14

Christos Sotiriou

1 reference

19 August 2017

10

Manasa Ramakrishna

1 reference

19 August 2017

Johan Staaf

6

1 reference

19 August 2017

Arie B Brinkman

8

1 reference

19 August 2017

Adam Butler

11

1 reference

19 August 2017

Hyung-Yong Kim

12

1 reference

19 August 2017

Åke Borg

13

1 reference

19 August 2017

Peter J Campbell

16

1 reference

19 August 2017

Jorunn E Eyfjord

20

1 reference

19 August 2017

Alastair M Thompson

21

1 reference

19 August 2017

John W M Martens

24

1 reference

19 August 2017

Andrea L Richardson

26

1 reference

19 August 2017

Gu Kong

27

1 reference

19 August 2017

Gilles Thomas

28

1 reference

19 August 2017

Cristina Rada

30

1 reference

19 August 2017

language of work or name

English

0 references

publication date

2 May 2016

1 reference

19 August 2017

Nature Communications

1 reference

19 August 2017

7

1 reference

19 August 2017

11383

1 reference

Creative Commons Attribution 4.0 International

19 August 2017

start time

2 May 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Landscape of somatic mutations in 560 breast cancer whole-genome sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Molecular Combing of Single DNA Molecules on the 10 Megabase Scale

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

DNA replication origin activation in space and time

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Differential DNA mismatch repair underlies mutation rate variation across the human genome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Cell-of-origin chromatin organization shapes the mutational landscape of cancer

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Homologous-recombination-deficient tumours are dependent on Polθ-mediated repair

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Mammalian polymerase θ promotes alternative NHEJ and suppresses recombination

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Heterogeneous polymerase fidelity and mismatch repair bias genome variation and composition.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Mechanisms underlying mutational signatures in human cancers

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Association of a germline copy number polymorphism of APOBEC3A and APOBEC3B with burden of putative APOBEC-dependent mutations in breast cancer

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Break-induced replication repair of damaged forks induces genomic duplications in human cells.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Signatures of mutational processes in human cancer

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Principles and concepts of DNA replication in bacteria, archaea, and eukarya

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

NMR structure of human restriction factor APOBEC3A reveals substrate binding and enzyme specificity

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Replication stress-induced genome instability: the dark side of replication maintenance by homologous recombination

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

APOBEC3G cytosine deamination hotspots are defined by both sequence context and single-stranded DNA secondary structure

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Deciphering signatures of mutational processes operative in human cancer

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Differential relationship of DNA replication timing to different forms of human mutation and variation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Controls of nucleosome positioning in the human genome.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Somatic rearrangements across cancer reveal classes of samples with distinct patterns of DNA breakage and rearrangement-induced hypermutability

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Ubiquitous heterogeneity and asymmetry of the chromatin environment at regulatory elements

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

An integrated encyclopedia of DNA elements in the human genome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Mutational processes molding the genomes of 21 breast cancers

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

The life history of 21 breast cancers

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Mammalian mismatch repair: error-free or error-prone?

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Interplay between mismatch repair and chromatin assembly

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Evidence for sequential and increasing activation of replication origins along replication timing gradients in the human genome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

DNA replication timing and long-range DNA interactions predict mutational landscapes of cancer genomes

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Impact of chromatin structure on sequence variability in the human genome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Collaboration and competition between DNA double‐strand break repair pathways

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

A comprehensive catalogue of somatic mutations from a human cancer genome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Decreased replication origin activity in temporal transition regions

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

DNA repair in mammalian cells : Nucleotide excision repair: variations on versatility

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Chromatin-associated periodicity in genetic variation downstream of transcriptional start sites.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Transcription-coupled DNA repair: two decades of progress and surprises

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

The AID/APOBEC family of nucleic acid mutators.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Genome instability: a mechanistic view of its causes and consequences

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Good timing in the cell cycle for precise DNA repair by BRCA1.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

RNase-sensitive DNA modification(s) initiates S. pombe mating-type switching

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

The "A" rule revisited: polymerases as determinants of mutational specificity

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

RNA editing enzyme APOBEC1 and some of its homologs can act as DNA mutators

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Making sense of eukaryotic DNA replication origins

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Fission yeast switches mating type by a replication-recombination coupled process

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Rev1 is essential for DNA damage tolerance and non-templated immunoglobulin gene mutation in a vertebrate cell line.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

DNA replication timing and higher-order nuclear organization determine single-nucleotide substitution patterns in cancer genomes

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

DNA replication timing: random thoughts about origin firing

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

The spatial and temporal organization of origin firing during the S-phase of fission yeast

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Human mutation rate associated with DNA replication timing

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

DNA replication timing and selection shape the landscape of nucleotide variation in cancer genomes.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Chromatin organization is a major influence on regional mutation rates in human cancer cells.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Transcription arrest at an abasic site in the transcribed strand of template DNA.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

Transcriptional inhibition by an oxidized abasic site in DNA.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5001788

3 September 2018

Identifiers

DOI

10.1038/NCOMMS11383

1 reference

19 August 2017

0 references

1 reference

19 August 2017

PubMed publication ID

27136393

1 reference