(Q34064701)

30 July 2017

The rate-limiting step in the folding of a large ribozyme without kinetic traps (English)

1 reference

30 July 2017

0 references

X-W Fang

1

1 reference

30 July 2017

P Thiyagarajan

series ordinal

2

1 reference

30 July 2017

T R Sosnick

series ordinal

3

1 reference

30 July 2017

T Pan

series ordinal

4

1 reference

30 July 2017

language of work or name

English

0 references

publication date

1 June 2002

1 reference

Proceedings of the National Academy of Sciences of the United States of America

30 July 2017

1 reference

30 July 2017

99

1 reference

30 July 2017

8518-8523

1 reference

30 July 2017

13

1 reference

Mg2+-dependent conformational change of RNA studied by fluorescence correlation and FRET on immobilized single molecules.

30 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124294

Rapid compaction during RNA folding

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124294

Beyond kinetic traps in RNA folding

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124294

Crystal structure of a hairpin ribozyme-inhibitor complex with implications for catalysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124294

The thermodynamic origin of the stability of a thermophilic ribozyme.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124294

Multiple folding pathways for the P4-P6 RNA domain

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124294

The crystal structure of yeast phenylalanine tRNA at 1.93 A resolution: a classic structure revisited

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124294

The complete atomic structure of the large ribosomal subunit at 2.4 A resolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124294

The crystal structure of yeast phenylalanine tRNA at 2.0 A resolution: cleavage by Mg(2+) in 15-year old crystals

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124294

Recent insights on RNA folding mechanisms from catalytic RNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124294

An optimal Mg(2+) concentration for kinetic folding of the tetrahymena ribozyme

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124294

Crystal structure of a hepatitis delta virus ribozyme

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124294

Contact order, transition state placement and the refolding rates of single domain proteins.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124294

Molecular collapse: the rate-limiting step in two-state cytochrome c folding

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124294

Slow folding kinetics of RNase P RNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124294

Comparative analysis of ribonuclease P RNA using gene sequences from natural microbial populations reveals tertiary structural elements

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124294

Conformational changes of transfer ribonucleic acid. Relaxation kinetics of the early melting transition of methionine transfer ribonucleic acid (Escherichia coli)

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124294

Cooperative binding of magnesium to transfer ribonucleic acid studied by a fluorescent probe

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

Fast folding of a ribozyme by stabilizing core interactions: evidence for multiple folding pathways in RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

Role of counterion condensation in folding of the Tetrahymena ribozyme. II. Counterion-dependence of folding kinetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

Probing the folding landscape of the Tetrahymena ribozyme: commitment to form the native conformation is late in the folding pathway.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

Productive folding to the native state by a group II intron ribozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

Calculating the electrostatic properties of RNA provides new insights into molecular interactions and function.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

Mg(2+) binding to tRNA revisited: the nonlinear Poisson-Boltzmann model.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

A Single-Molecule Study of RNA Catalysis and Folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

Folding of RNA involves parallel pathways

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

RNA Folding at Millisecond Intervals by Synchrotron Hydroxyl Radical Footprinting

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

Folding intermediates of a self-splicing RNA: mispairing of the catalytic core

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

Folding Mechanism of theTetrahymenaRibozyme P4−P6 Domain†

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

Tritium exchange studies of transfer RNA in native and denatured conformations

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

Kinetic intermediates in RNA folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

The time dependence of chemical modification reveals slow steps in the folding of a group I ribozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

The kinetic folding pathway of the Tetrahymena ribozyme reveals possible similarities between RNA and protein folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

Intermediates and kinetic traps in the folding of a large ribozyme revealed by circular dichroism and UV absorbance spectroscopies and catalytic activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

Kinetic intermediates trapped by native interactions in RNA folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

Pathway modulation, circular permutation and rapid RNA folding under kinetic control

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

Mg2+-dependent folding of a large ribozyme without kinetic traps

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

Kinetic analysis of the M1 RNA folding pathway

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

A collapsed non-native RNA folding state

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

A magnesium ion core at the heart of a ribozyme domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

Mg2+-dependent compaction and folding of yeast tRNAPhe and the catalytic domain of the B. subtilis RNase P RNA determined by small-angle X-ray scattering

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

A thermodynamic framework and cooperativity in the tertiary folding of a Mg2+-dependent ribozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

Applicability of urea in the thermodynamic analysis of secondary and tertiary RNA folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

Exploration of metal ion binding sites in RNA folds by Brownian-dynamics simulations

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.142288399

Understanding protein hydrogen bond formation with kinetic H/D amide isotope effects

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12084911

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.142288399

1 reference

30 July 2017

0 references

1 reference

30 July 2017

1 reference