(Q34083139)

30 July 2017

2 references

19 September 2019

25 November 2020

Mass spectrometry-based proteomics in cell biology (English)

1 reference

30 July 2017

Mass spectrometry–based proteomics in cell biology (English)

1 reference

DOI

10.1083/JCB.201004052

https://api.crossref.org/works/10.1083/JCB.201004052

biomedical investigative technique

21 June 2024

main subject

1 reference

19 September 2019

1 reference

25 November 2020

0 references

1 reference

1

Tobias C. Walther

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20733050

21 June 2024

author name string

Matthias Mann

series ordinal

2

1 reference

30 July 2017

language of work or name

English

0 references

publication date

1 August 2010

1 reference

full work available at URL

30 July 2017

23 August 2010

2 references

19 September 2019

25 November 2020

https://rupress.org/jcb/article-pdf/190/4/491/1348347/jcb_201004052.pdf

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20733050

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/20733050/pdf/?tool=EBI

21 June 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20733050

http://intl.jcb.org/cgi/content/abstract/190/4/491

21 June 2024

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20733050

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/20733050/?tool=EBI

21 June 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20733050

https://europepmc.org/articles/PMC2928005

21 June 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20733050

https://europepmc.org/articles/PMC2928005?pdf=render

21 June 2024

online access status

open access

content deliverer

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20733050

https://rupress.org/jcb/article-pdf/190/4/491/1568901/jcb_201004052.pdf

21 June 2024

1 reference

DOI

10.1083/JCB.201004052

https://api.crossref.org/works/10.1083/JCB.201004052

21 June 2024

published in

Journal of Cell Biology

3 references

30 July 2017

19 September 2019

25 November 2020

190

1 reference

30 July 2017

issue

4

1 reference

30 July 2017

page(s)

491-500

1 reference

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

30 July 2017

cites work

1 reference

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Quantitative proteomics combined with BAC TransgeneOmics reveals in vivo protein interactions

5 July 2018

1 reference

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Super-SILAC mix for quantitative proteomics of human tumor tissue

5 July 2018

1 reference

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Acetylation of metabolic enzymes coordinates carbon source utilization and metabolic flux

5 July 2018

1 reference

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Regulation of cellular metabolism by protein lysine acetylation

5 July 2018

1 reference

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A guided tour of the Trans-Proteomic Pipeline

5 July 2018

1 reference

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A quantitative proteomics analysis of subcellular proteome localization and changes induced by DNA damage.

5 July 2018

1 reference

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Proteome differences between brown and white fat mitochondria reveal specialized metabolic functions

5 July 2018

1 reference

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Quantitative proteomics in biological research

5 July 2018

1 reference

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Full dynamic range proteome analysis of S. cerevisiae by targeted proteomics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Lysine acetylation targets protein complexes and co-regulates major cellular functions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Proteome-wide cellular protein concentrations of the human pathogen Leptospira interrogans

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

A HUPO test sample study reveals common problems in mass spectrometry-based proteomics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Universal sample preparation method for proteome analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Mapping organelle proteins and protein complexes in Drosophila melanogaster

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Bioinformatics analysis of mass spectrometry-based proteomics data sets

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Quantitative interaction proteomics using mass spectrometry

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

A complex-based reconstruction of the Saccharomyces cerevisiae interactome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Identification of SUMO target proteins by quantitative proteomics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Multiple reaction monitoring for quantitative biomarker analysis in proteomics and metabolomics.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Identifying specific protein interaction partners using quantitative mass spectrometry and bead proteomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Quantitative phosphoproteomics by mass spectrometry: past, present, and future

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Quantitative phosphoproteomic analysis of signaling network dynamics.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

A quantitative analysis software tool for mass spectrometry-based proteomics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

The biological impact of mass-spectrometry-based proteomics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Top-down MS, a powerful complement to the high capabilities of proteolysis proteomics.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

A versatile nanotrap for biochemical and functional studies with fluorescent fusion proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Mapping protein post-translational modifications with mass spectrometry

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Quantitative chemical proteomics reveals mechanisms of action of clinical ABL kinase inhibitors

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Analysis of protein complexes using mass spectrometry

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Toward a comprehensive atlas of the physical interactome of Saccharomyces cerevisiae

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Global, in vivo, and site-specific phosphorylation dynamics in signaling networks

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Orbitrap Mass Analyzer – Overview and Applications in Proteomics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Strategies for measuring dynamics: the temporal component of proteomics.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Substrate and functional diversity of lysine acetylation revealed by a proteomics survey

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Interpreting the protein language using proteomics.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Mass spectrometry and protein analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Global landscape of protein complexes in the yeast Saccharomyces cerevisiae

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Proteome survey reveals modularity of the yeast cell machinery

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Mass spectrometry-based proteomics turns quantitative

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Hybrid quadrupole/time-of-flight mass spectrometers for analysis of biomolecules

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Proteomics of organelles and large cellular structures

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Fluorescent proteins as proteomic probes.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Exponentially modified protein abundance index (emPAI) for estimation of absolute protein amount in proteomics by the number of sequenced peptides per protein

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Large-scale database searching using tandem mass spectra: looking up the answer in the back of the book

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Nucleolar proteome dynamics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Fragmentation pathways of protonated peptides

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

A model for random sampling and estimation of relative protein abundance in shotgun proteomics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

TANDEM: matching proteins with tandem mass spectra

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Stable-isotope dimethyl labeling for quantitative proteomics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Proteomic characterization of the human centrosome by protein correlation profiling

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Global analysis of protein expression in yeast

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Global analysis of protein localization in budding yeast

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Nuclear membrane proteins with potential disease links found by subtractive proteomics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

A proteomics strategy to elucidate functional protein-protein interactions applied to EGF signaling

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Large-scale analysis of the yeast proteome by multidimensional protein identification technology

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Gene ontology: tool for the unification of biology

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Electrostatic axially harmonic orbital trapping: a high-performance technique of mass analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

The yeast nuclear pore complex: composition, architecture, and transport mechanism

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Probability-based protein identification by searching sequence databases using mass spectrometry data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

A generic protein purification method for protein complex characterization and proteome exploration

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Direct analysis of protein complexes using mass spectrometry

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Exit from mitosis is triggered by Tem1-dependent release of the protein phosphatase Cdc14 from nucleolar RENT complex

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Identification of the proteins of the yeast U1 small nuclear ribonucleoprotein complex by mass spectrometry

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Mass Spectrometric Sequencing of Proteins from Silver-Stained Polyacrylamide Gels

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

Electrospray ionization for mass spectrometry of large biomolecules

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928005

A suite of algorithms for the comprehensive analysis of complex protein mixtures using high-resolution LC-MS.

5 July 2018

1 reference

https://api.crossref.org/works/10.1083%2FJCB.201004052

Multiplex peptide stable isotope dimethyl labeling for quantitative proteomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1083%2FJCB.201004052

A combined approach for the localization and tandem affinity purification of protein complexes from metazoans.

21 January 2018

1 reference

https://api.crossref.org/works/10.1083%2FJCB.201004052

Interfacing the Orbitrap Mass Analyzer to an Electrospray Ion Source

21 January 2018

1 reference

https://api.crossref.org/works/10.1083%2FJCB.201004052

SILAC mouse for quantitative proteomics uncovers kindlin-3 as an essential factor for red blood cell function

21 January 2018

1 reference

https://api.crossref.org/works/10.1083%2FJCB.201004052

Proteomics analysis of the nucleolus in adenovirus-infected cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1083%2FJCB.201004052

Quantitative proteomics reveals subset-specific viral recognition in dendritic cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1083%2FJCB.201004052

Comparison of label-free methods for quantifying human proteins by shotgun proteomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1083%2FJCB.201004052

A sensitive mass spectrometric method for hypothesis-driven detection of peptide post-translational modifications: multiple reaction monitoring-initiated detection and sequencing (MIDAS).

21 January 2018

1 reference

https://api.crossref.org/works/10.1083%2FJCB.201004052

Localization of organelle proteins by isotope tagging (LOPIT)

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20733050

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The study of macromolecular complexes by quantitative proteomics

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20733050

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1083/JCB.201004052

1 reference

30 July 2017

1 reference

30 July 2017

1 reference