(Q34086895)

30 July 2017

Directional gene expression and antisense transcripts in sexual and asexual stages of Plasmodium falciparum (English)

1 reference

30 July 2017

Plasmodium falciparum

0 references

0 references

5

Alvaro Molina-Cruz

1 reference

30 July 2017

Carolina Barillas-Mury

7

object named as

Carolina Barillas-Mury

1 reference

30 July 2017

María J López-Barragán

1

1 reference

30 July 2017

Jacob Lemieux

2

1 reference

30 July 2017

Mariam Quiñones

3

1 reference

30 July 2017

Kim C Williamson

4

1 reference

30 July 2017

Kairong Cui

6

1 reference

30 July 2017

Keji Zhao

8

1 reference

30 July 2017

Xin-zhuan Su

9

1 reference

30 July 2017

language of work or name

English

0 references

publication date

30 November 2011

1 reference

30 July 2017

1 reference

30 July 2017

12

1 reference

30 July 2017

587

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-12-587

30 July 2017

0 references

cites work

NSR-seq transcriptional profiling enables identification of a gene signature of Plasmodium falciparum parasites infecting children

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

RNA-Seq analysis of splicing in Plasmodium falciparum uncovers new splice junctions, alternative splicing and splicing of antisense transcripts

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

RNA sequencing: advances, challenges and opportunities

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

H2A.Z demarcates intergenic regions of the plasmodium falciparum epigenome that are dynamically marked by H3K9ac and H3K4me3

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Effect of PCR extension temperature on high-throughput sequencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Universal features of post-transcriptional gene regulation are critical for Plasmodium zygote development

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

New insights into the blood-stage transcriptome of Plasmodium falciparum using RNA-Seq

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

BEDTools: a flexible suite of utilities for comparing genomic features

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

A global view of the nonprotein-coding transcriptome in Plasmodium falciparum

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Transcriptome analysis by strand-specific sequencing of complementary DNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Molecular genetics and comparative genomics reveal RNAi is not functional in malaria parasites

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Next-generation DNA sequencing of paired-end tags (PET) for transcriptome and genome analyses

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

TopHat: discovering splice junctions with RNA-Seq

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Analysis of small nucleolar RNAs reveals unique genetic features in malaria parasites

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

What do natural antisense transcripts regulate?

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Accurate whole human genome sequencing using reversible terminator chemistry

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Genome-wide compensatory changes accompany drug- selected mutations in the Plasmodium falciparum crt gene

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

A conserved U-rich RNA region implicated in regulation of translation in Plasmodium female gametocytes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Genome-wide discovery and verification of novel structured RNAs in Plasmodium falciparum

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Structural RNAs of known and unknown function identified in malaria parasites by comparative genomics and RNA analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

cDNA sequences reveal considerable gene prediction inaccuracy in the Plasmodium falciparum genome.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Genome-wide natural antisense transcription: coupling its regulation to its different regulatory mechanisms

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Regulation of sexual development of Plasmodium by translational repression

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Antisense transcription in the mammalian transcriptome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Genome sequencing in microfabricated high-density picolitre reactors

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

The Plasmodium falciparum sexual development transcriptome: a microarray analysis using ontology-based pattern identification

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

The transcriptome of the intraerythrocytic developmental cycle of Plasmodium falciparum

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Discovery of gene function by expression profiling of the malaria parasite life cycle

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Genome sequence of the human malaria parasite Plasmodium falciparum

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Discordant protein and mRNA expression in lung adenocarcinomas

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Analysis of transcriptomes of human malaria parasite Plasmodium falciparum using full-length enriched library: identification of novel genes and diverse transcription start sites of messenger RNAs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Profiling the malaria genome: a gene survey of three species of malaria parasite with comparison to other apicomplexan species.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

FULL-malaria: a database for a full-length enriched cDNA library from human malaria parasite, Plasmodium falciparum

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Correlation between protein and mRNA abundance in yeast

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Regulation of gene expression by natural antisense RNA transcripts

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Regulation of plant gene expression by antisense RNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Biological function of unannotated transcription during the early development of Drosophila melanogaster

5 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-587

Analysis of expressed sequence tags from Plasmodium falciparum.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-587

Plasmodium falciparum var genes are regulated by two regions with separate promoters, one upstream of the coding region and a second within the intron.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-587

Widespread distribution of antisense transcripts in the Plasmodium falciparum genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-587

Inhibition of Plasmodium falciparum hypoxanthine-guanine phosphoribosyltransferase mRNA by antisense oligodeoxynucleotide sequence.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-587

Inhibition of Plasmodium falciparum clag9 gene function by antisense RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-587

Antisense oligonucleotides targeting malarial aldolase inhibit the asexual erythrocytic stages of Plasmodium falciparum.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-587

Comparasite: a database for comparative study of transcriptomes of parasites defined by full-length cDNAs

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266614

Complete in vitro maturation of Plasmodium falciparum gametocytes

28 October 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-587

The development and impact of 454 sequencing

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22129310

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-12-587

1 reference

Dimensions Publication ID

30 July 2017

0 references

1 reference

30 July 2017

1 reference