(Q34087572)

30 July 2017

title

MetaBinG: using GPUs to accelerate metagenomic sequence classification (English)

1 reference

30 July 2017

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Chaochun Wei

4

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author name string

Peng Jia

series ordinal

1

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30 July 2017

Liming Xuan

series ordinal

2

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30 July 2017

Lei Liu

series ordinal

3

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30 July 2017

language of work or name

English

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publication date

23 November 2011

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30 July 2017

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30 July 2017

volume

6

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30 July 2017

issue

11

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30 July 2017

page(s)

e25353

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Creative Commons Attribution 4.0 International

30 July 2017

copyright license

start time

23 November 2011

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April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

PhymmBL expanded: confidence scores, custom databases, parallelization and more

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3223155

GPU-BLAST: using graphics processors to accelerate protein sequence alignment

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3223155

NBC: the Naïve Bayes Classification tool webserver for taxonomic classification of metagenomic reads

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3223155

GPU computing for systems biology

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3223155

Using the metagenomics RAST server (MG-RAST) for analyzing shotgun metagenomes.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3223155

Next-generation DNA sequencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3223155

The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3223155

CAMERA: a community resource for metagenomics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3223155

Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3223155

Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3223155

The metagenome of a biogas-producing microbial community of a production-scale biogas plant fermenter analysed by the 454-pyrosequencing technology

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3223155

10.1371/JOURNAL.PONE.0025353

28 October 2018

Identifiers

DOI

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30 July 2017

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30 July 2017

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