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Compositional bias in DNA.
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scholarly article
1 reference
stated in
Europe PubMed Central
PubMed ID
11088017
retrieved
30 July 2017
review article
1 reference
stated in
Europe PubMed Central
title
Compositional bias in DNA.
(English)
1 reference
stated in
Europe PubMed Central
PubMed ID
11088017
retrieved
30 July 2017
main subject
bias
1 reference
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inferred from title
author name string
Gautier C
series ordinal
1
1 reference
stated in
Europe PubMed Central
PubMed ID
11088017
retrieved
30 July 2017
publication date
1 December 2000
1 reference
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Europe PubMed Central
PubMed ID
11088017
retrieved
30 July 2017
published in
Current Opinion in Genetics & Development
1 reference
stated in
Europe PubMed Central
PubMed ID
11088017
retrieved
30 July 2017
volume
10
1 reference
stated in
Europe PubMed Central
PubMed ID
11088017
retrieved
30 July 2017
page(s)
656-661
1 reference
stated in
Europe PubMed Central
PubMed ID
11088017
retrieved
30 July 2017
issue
6
1 reference
stated in
Europe PubMed Central
PubMed ID
11088017
retrieved
30 July 2017
cites work
Relationships between genomic G+C content, RNA secondary structures, and optimal growth temperature in prokaryotes
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The unusual mutagenic specificity of an E. Coli mutator gene
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Codon base randomness and composition drift in coliphage
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Correlation between the abundance of yeast transfer RNAs and the occurrence of the respective codons in protein genes. Differences in synonymous codon choice patterns of yeast and Escherichia coli with reference to the abundance of isoaccepting tran
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Codon usage in bacteria: correlation with gene expressivity
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Studies of codon usage and tRNA genes of 18 unicellular organisms and quantification of Bacillus subtilis tRNAs: gene expression level and species-specific diversity of codon usage based on multivariate analysis
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Codon usage and gene function are related in sequences of Arabidopsis thaliana
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Expression pattern and, surprisingly, gene length shape codon usage in Caenorhabditis, Drosophila, and Arabidopsis.
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tRNA gene number and codon usage in the C. elegans genome are co-adapted for optimal translation of highly expressed genes
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7 January 2021
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Two aspects of DNA base composition: G+C content and translation-coupled deviation from intra-strand rule of A = T and G = C.
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https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900144-1
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7 January 2021
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Codon usage and genome evolution.
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reference URL
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7 January 2021
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Translational selection and molecular evolution
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7 January 2021
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Coding sequence evolution
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7 January 2021
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The genome sequence of the plant pathogen Xylella fastidiosa. The Xylella fastidiosa Consortium of the Organization for Nucleotide Sequencing and Analysis
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https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900144-1
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Oriloc: prediction of replication boundaries in unannotated bacterial chromosomes
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Analyzing genomes with cumulative skew diagrams
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7 January 2021
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Strand asymmetries in DNA evolution
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7 January 2021
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Asymmetric substitution patterns: a review of possible underlying mutational or selective mechanisms
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7 January 2021
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When polymerases collide: replication and the transcriptional organization of the E. coli chromosome
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Intrastrand parity rules of DNA base composition and usage biases of synonymous codons.
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Properties of a general model of DNA evolution under no-strand-bias conditions.
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Asymmetric substitution patterns in the two DNA strands of bacteria
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Evolution of DNA base composition under no-strand-bias conditions when the substitution rates are not constant.
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7 January 2021
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Asymmetrical directional mutation pressure in the mitochondrial genome of mammals.
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7 January 2021
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Proteome composition and codon usage in spirochaetes: species-specific and DNA strand-specific mutational biases
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7 January 2021
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The contributions of replication orientation, gene direction, and signal sequences to base-composition asymmetries in bacterial genomes
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Hydrophobicity, expressivity and aromaticity are the major trends of amino-acid usage in 999 Escherichia coli chromosome-encoded genes
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7 January 2021
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Influence of genomic G+C content on average amino-acid composition of proteins from 59 bacterial species
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7 January 2021
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Base composition skews, replication orientation, and gene orientation in 12 prokaryote genomes
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Replicational and transcriptional selection on codon usage in Borrelia burgdorferi
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Universal replication biases in bacteria
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Functional polarization of the Escherichia coli chromosome terminus: the dif site acts in chromosome dimer resolution only when located between long stretches of opposite polarity
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An analysis of eukaryotic genomes by density gradient centrifugation
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7 January 2021
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Isochores and the evolutionary genomics of vertebrates
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7 January 2021
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Diversity in G + C content at the third position of codons in vertebrate genes and its cause
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Correlations between the compositional properties of human genes, codon usage, and amino acid composition of proteins
1 reference
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7 January 2021
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Human coding and noncoding DNA: compositional correlations
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7 January 2021
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The gene distribution of the human genome
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7 January 2021
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The distribution of genes in the human genome
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7 January 2021
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The distribution of interspersed repeats is nonuniform and conserved in the mouse and human genomes.
1 reference
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7 January 2021
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The isopycnic, compartmentalized integration of Rous sarcoma virus sequences
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Regional specificity of HTLV-I proviral integration in the human genome
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7 January 2021
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CpG doublets, CpG islands and Alu repeats in long human DNA sequences from different isochore families.
1 reference
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7 January 2021
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Global variation in G+C content along vertebrate genome DNA. Possible correlation with chromosome band structures.
1 reference
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Crossref
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7 January 2021
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Evident diversity of codon usage patterns of human genes with respect to chromosome banding patterns and chromosome numbers; relation between nucleotide sequence data and cytogenetic data
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7 January 2021
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Compositional properties of telomeric regions from human chromosomes
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Correlations between isochores and chromosomal bands in the human genome.
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7 January 2021
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Identification of the gene-richest bands in human chromosomes
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7 January 2021
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Recombination and mammalian genome evolution
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7 January 2021
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The DNA sequence of human chromosome 21
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7 January 2021
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The DNA sequence of human chromosome 22
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7 January 2021
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A boundary of long-range G + C% mosaic domains in the human MHC locus: pseudoautosomal boundary-like sequence exists near the boundary.
1 reference
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7 January 2021
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Complete sequence and gene map of a human major histocompatibility complex. The MHC sequencing consortium
1 reference
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Gene organisation, sequence variation and isochore structure at the centromeric boundary of the human MHC.
1 reference
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7 January 2021
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The isochore organization and the compositional distribution of homologous coding sequences in the nuclear genome of plants
1 reference
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7 January 2021
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Compositional patterns in the nuclear genome of cold-blooded vertebrates
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7 January 2021
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Evolution of genome size and DNA base composition in reptiles
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Warm-blooded isochore structure in Nile crocodile and turtle
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7 January 2021
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The compositional distribution of coding sequences and DNA molecules in humans and murids
1 reference
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reference URL
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Codon usage changes and sequence dissimilarity between human and rat
1 reference
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Evidence for higher rates of nucleotide substitution in rodents than in man
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7 January 2021
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Mutation rates differ among regions of the mammalian genome
1 reference
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7 January 2021
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Chromosomal location effects on gene sequence evolution in mammals
1 reference
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Isochores result from mutation not selection
1 reference
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7 January 2021
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Mutation pattern variation among regions of the primate genome
1 reference
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Precise switching of DNA replication timing in the GC content transition area in the human major histocompatibility complex.
1 reference
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The evolution of base composition and phylogenetic inference
1 reference
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reference URL
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7 January 2021
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Identifiers
DOI
10.1016/S0959-437X(00)00144-1
1 reference
stated in
Europe PubMed Central
PubMed ID
11088017
retrieved
30 July 2017
PubMed ID
11088017
1 reference
stated in
Europe PubMed Central
PubMed ID
11088017
retrieved
30 July 2017
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