(Q34143940)

English

The combination of a genome-wide association study of lymphocyte count and analysis of gene expression data reveals novel asthma candidate genes

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scholarly article

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Europe PubMed Central

PubMed publication ID

31 July 2017

The combination of a genome-wide association study of lymphocyte count and analysis of gene expression data reveals novel asthma candidate genes (English)

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

genome-wide association study

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1 reference

based on heuristic

inferred from title

gene expression data

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based on heuristic

inferred from title

8

object named as

Carole Ober

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

9

object named as

Yoav Gilad

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Europe PubMed Central

PubMed publication ID

31 July 2017

author name string

Darren A Cusanovich

1

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Europe PubMed Central

PubMed publication ID

31 July 2017

Christine Billstrand

2

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Europe PubMed Central

PubMed publication ID

31 July 2017

Xiang Zhou

3

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

Claudia Chavarria

4

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

Sherryl De Leon

5

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

Katelyn Michelini

6

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

Athma A Pai

7

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

publication date

27 January 2012

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Europe PubMed Central

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31 July 2017

Human Molecular Genetics

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Europe PubMed Central

PubMed publication ID

31 July 2017

21

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Europe PubMed Central

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31 July 2017

9

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Europe PubMed Central

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31 July 2017

2111-2123

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Europe PubMed Central

PubMed publication ID

31 July 2017

describes a project that uses

genome-wide association study

1 reference

based on heuristic

inferred from title

The BCL11B tumor suppressor is mutated across the major molecular subtypes of T-cell acute lymphoblastic leukemia

1 reference

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Critical role of Bcl11b in suppressor function of T regulatory cells and prevention of inflammatory bowel disease

1 reference

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Meta-analysis of genome-wide association studies of asthma in ethnically diverse North American populations

1 reference

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Multiple loci are associated with white blood cell phenotypes

1 reference

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Genome-wide association study of white blood cell count in 16,388 African Americans: the continental origins and genetic epidemiology network (COGENT).

1 reference

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Identification of nine novel loci associated with white blood cell subtypes in a Japanese population

1 reference

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A common spinal muscular atrophy deletion mutation is present on a single founder haplotype in the US Hutterites

1 reference

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Beyond missing heritability: prediction of complex traits

1 reference

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Asthma-associated polymorphisms in 17q21 influence cord blood ORMDL3 and GSDMA gene expression and IL-17 secretion

1 reference

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Novel method to estimate the phenotypic variation explained by genome-wide association studies reveals large fraction of the missing heritability

1 reference

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5 July 2018

Estimating missing heritability for disease from genome-wide association studies

1 reference

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5 July 2018

Cutting edge: distinct glycolytic and lipid oxidative metabolic programs are essential for effector and regulatory CD4+ T cell subsets.

1 reference

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The effects of EBV transformation on gene expression levels and methylation profiles

1 reference

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T-cell subset regulation in atopy

1 reference

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Gene expression in skin and lymphoblastoid cells: Refined statistical method reveals extensive overlap in cis-eQTL signals

1 reference

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5 July 2018

Critical roles of Bcl11b in T-cell development and maintenance of T-cell identity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

Association analyses of 249,796 individuals reveal 18 new loci associated with body mass index

1 reference

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A large-scale, consortium-based genomewide association study of asthma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

Mapping of numerous disease-associated expression polymorphisms in primary peripheral blood CD4+ lymphocytes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

The role of the T cell in asthma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

The metabolic life and times of a T-cell

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

LocusZoom: regional visualization of genome-wide association scan results

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

Common SNPs explain a large proportion of the heritability for human height

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

Use of genome-wide expression data to mine the "Gray Zone" of GWA studies leads to novel candidate obesity genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

Genetics and beyond--the transcriptome of human monocytes and disease susceptibility

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

Missing heritability and strategies for finding the underlying causes of complex disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

Liver and adipose expression associated SNPs are enriched for association to type 2 diabetes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

A sequence variant on 17q21 is associated with age at onset and severity of asthma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

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Candidate causal regulatory effects by integration of expression QTLs with complex trait genetic associations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

Trait-associated SNPs are more likely to be eQTLs: annotation to enhance discovery from GWAS

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

GWAS: heritability missing in action?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

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Heritable and non-genetic factors as variables of pharmacologic phenotypes in lymphoblastoid cell lines

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

Galaxy: a web-based genome analysis tool for experimentalists

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

KEGG for representation and analysis of molecular networks involving diseases and drugs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

Phenopedia and Genopedia: disease-centered and gene-centered views of the evolving knowledge of human genetic associations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

Finding the missing heritability of complex diseases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

Allele-specific chromatin remodeling in the ZPBP2/GSDMB/ORMDL3 locus associated with the risk of asthma and autoimmune disease.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

Expression quantitative trait loci detected in cell lines are often present in primary tissues

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

Common regulatory variation impacts gene expression in a cell type-dependent manner

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

(Too) great expectations: the challenges in replicating asthma disease genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

Assessing the reproducibility of asthma candidate gene associations, using genome-wide data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

Genome-wide association study of plasma lipoprotein(a) levels identifies multiple genes on chromosome 6q

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

Genetic analysis of human traits in vitro: drug response and gene expression in lymphoblastoid cell lines

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

Personal genomes: The case of the missing heritability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

Genomewide analysis of PRC1 and PRC2 occupancy identifies two classes of bivalent domains

1 reference

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SNAP: a web-based tool for identification and annotation of proxy SNPs using HapMap

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

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Targeted screening of cis-regulatory variation in human haplotypes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

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High-resolution mapping of expression-QTLs yields insight into human gene regulation

1 reference

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Accurate discovery of expression quantitative trait loci under confounding from spurious and genuine regulatory hotspots

1 reference

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5 July 2018

Integrated genotype calling and association analysis of SNPs, common copy number polymorphisms and rare CNVs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

lumi: a pipeline for processing Illumina microarray

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Effect of variation in CHI3L1 on serum YKL-40 level, risk of asthma, and lung function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

Discovering susceptibility genes for asthma and allergy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

Population genomics of human gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

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Genetic variants regulating ORMDL3 expression contribute to the risk of childhood asthma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

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GeneTrail--advanced gene set enrichment analysis

1 reference

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Relative impact of nucleotide and copy number variation on gene expression phenotypes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

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Global variation in copy number in the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

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Immune dysregulation in asthma

1 reference

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Regulation of the energy sensor AMP-activated protein kinase by antigen receptor and Ca2+ in T lymphocytes.

1 reference

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Suz12 binds to silenced regions of the genome in a cell-type-specific manner

1 reference

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Asthma genetics 2006: the long and winding road to gene discovery.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

5 July 2018

Mapping determinants of human gene expression by regional and genome-wide association

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315207

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AMP-activated protein kinase induces a p53-dependent metabolic checkpoint

1 reference

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5 July 2018

The UCSC Table Browser data retrieval tool

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5 July 2018

Statistical significance for genomewide studies

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5 July 2018

Maintaining the norm: T-cell homeostasis

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Quantitative-trait homozygosity and association mapping and empirical genomewide significance in large, complex pedigrees: fasting serum-insulin level in the Hutterites

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The genetic dissection of complex traits in a founder population

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5 July 2018

A second-generation genomewide screen for asthma-susceptibility alleles in a founder population

1 reference

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Gene ontology: tool for the unification of biology

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Estimation of variance components of quantitative traits in inbred populations

1 reference

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KEGG: kyoto encyclopedia of genes and genomes

1 reference

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5 July 2018

Hints of hidden heritability in GWAS.

1 reference

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21 January 2018

Linkage analysis with dense SNP maps in isolated populations

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21 January 2018

Dependency on the polycomb gene Ezh2 distinguishes fetal from adult hematopoietic stem cells.

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21 January 2018

Evaluating the heritability explained by known susceptibility variants: a survey of ten complex diseases

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21 January 2018

Human CD8+ T cells and NK cells express and secrete S100B upon stimulation

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The sex-specific genetic architecture of quantitative traits in humans

1 reference

https://pubmed.ncbi.nlm.nih.gov/22286170

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sex-specific genetic architecture of asthma-associated quantitative trait loci in a founder population

1 reference

https://pubmed.ncbi.nlm.nih.gov/22286170

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/HMG/DDS021

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

ResearchGate publication ID

0 references

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