(Q34144431)

31 July 2017

Performance comparison and evaluation of software tools for microRNA deep-sequencing data analysis (English)

1 reference

31 July 2017

0 references

1 reference

0 references

Qing Jing

5

0 references

Bairong Shen

object named as

Bairong Shen

6

0 references

Wanwipa Vongsangnak

4

object named as

Wanwipa Vongsangnak

1 reference

31 July 2017

Yue Li

1

1 reference

31 July 2017

Zhuo Zhang

2

1 reference

31 July 2017

Feng Liu

3

1 reference

31 July 2017

language of work or name

English

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publication date

28 January 2012

1 reference

31 July 2017

Nucleic Acids Research

1 reference

31 July 2017

40

1 reference

31 July 2017

4298-4305

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31 July 2017

10

1 reference

Creative Commons Attribution-NonCommercial 3.0 Unported

31 July 2017

start time

7 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

MIReNA: finding microRNAs with high accuracy and no learning at genome scale and from deep sequencing data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378883

mirTools: microRNA profiling and discovery based on high-throughput sequencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378883

DSAP: deep-sequencing small RNA analysis pipeline

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378883

miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378883

miRExpress: analyzing high-throughput sequencing data for profiling microRNA expression

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378883

SOAP2: an improved ultrafast tool for short read alignment

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378883

miRanalyzer: a microRNA detection and analysis tool for next-generation sequencing experiments

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378883

The UCSC Genome Browser Database: update 2009

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378883

Discovering microRNAs from deep sequencing data using miRDeep

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378883

Striped Smith-Waterman speeds database searches six times over other SIMD implementations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378883

5 July 2018

Genomics of microRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378883

MicroRNA expression profiles classify human cancers

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378883

Principles of microRNA-target recognition

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378883

MicroRNAs: small RNAs with a big role in gene regulation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378883

Identification of novel genes coding for small expressed RNAs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378883

Identification of common molecular subsequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3378883

miRNAkey: a software for microRNA deep sequencing analysis.

5 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKS043

Lowly expressed human microRNA genes evolve rapidly

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKS043

21 January 2018

Identifiers

DOI

10.1093/NAR/GKS043

1 reference

31 July 2017

1 reference

31 July 2017

1 reference