(Q34153604)

31 July 2017

title

A ChIP-seq defined genome-wide map of vitamin D receptor binding: associations with disease and evolution (English)

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genome-wide association study

31 July 2017

main subject

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2

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14

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31 July 2017

Julian C Knight

16

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George C. Ebers

object named as

George C Ebers

15

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Lahiru Handunnetthi

object named as

Lahiru Handunnetthi

7

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Corey T Watson

object named as

Corey T Watson

11

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author name string

Sreeram V Ramagopalan

1

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31 July 2017

Antonio J Berlanga

3

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31 July 2017

Narelle J Maugeri

4

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31 July 2017

Matthew R Lincoln

5

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31 July 2017

Amy Burrell

6

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31 July 2017

Adam E Handel

8

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31 July 2017

Giulio Disanto

9

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31 July 2017

Sarah-Michelle Orton

10

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31 July 2017

Julia M Morahan

12

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31 July 2017

Gavin Giovannoni

13

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31 July 2017

publication date

24 August 2010

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31 July 2017

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31 July 2017

volume

20

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31 July 2017

issue

10

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31 July 2017

page(s)

1352-1360

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Heritable individual-specific and allele-specific chromatin signatures in humans

31 July 2017

cites work

1 reference

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Genome-wide analysis of the VDR/RXR cistrome in osteoblast cells provides new mechanistic insight into the actions of the vitamin D hormone

5 July 2018

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Direct and indirect induction by 1,25-dihydroxyvitamin D3 of the NOD2/CARD15-defensin beta2 innate immune pathway defective in Crohn disease

5 July 2018

1 reference

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5 July 2018

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5 July 2018

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Multifunctional enhancers regulate mouse and human vitamin D receptor gene transcription

5 July 2018

1 reference

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5 July 2018

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Genome-wide association study in a Chinese Han population identifies nine new susceptibility loci for systemic lupus erythematosus

5 July 2018

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5 July 2018

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5 July 2018

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Meta-analysis of genome scans and replication identify CD6, IRF8 and TNFRSF1A as new multiple sclerosis susceptibility loci

5 July 2018

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

5 July 2018

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5 July 2018

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Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci

5 July 2018

1 reference

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CD226 Gly307Ser association with multiple autoimmune diseases

5 July 2018

1 reference

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Model-based analysis of ChIP-Seq (MACS)

5 July 2018

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A sequence motif within chromatin entry sites directs MSL establishment on the Drosophila X chromosome

5 July 2018

1 reference

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Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease

5 July 2018

1 reference

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A genome-wide association study identifies novel alleles associated with hair color and skin pigmentation

5 July 2018

1 reference

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Discovering sequence motifs with arbitrary insertions and deletions

5 July 2018

1 reference

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Identification of ten loci associated with height highlights new biological pathways in human growth

5 July 2018

1 reference

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Environmental factors and multiple sclerosis.

5 July 2018

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5 July 2018

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Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945184

Functional characterization of vitamin D responding regions in the human 5-Lipoxygenase gene

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945184

Quantifying similarity between motifs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945184

The impact of chromatin organization of vitamin D target genes.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945184

A map of recent positive selection in the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945184

Regulation of the human cyclin C gene via multiple vitamin D3-responsive regions in its promoter

5 July 2018

1 reference

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Identification of target genes in breast cancer cells directly regulated by the SRC-3/AIB1 coactivator

5 July 2018

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Finishing the euchromatic sequence of the human genome

5 July 2018

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Bioconductor: open software development for computational biology and bioinformatics

5 July 2018

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A functional variant of lymphoid tyrosine phosphatase is associated with type I diabetes

5 July 2018

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5 July 2018

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Significance analysis of microarrays applied to the ionizing radiation response

5 July 2018

1 reference

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5 July 2018

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The evolution of human skin coloration

5 July 2018

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5 July 2018

1 reference

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Combining evidence using p-values: application to sequence homology searches

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945184

Fitting a mixture model by expectation maximization to discover motifs in biopolymers

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945184

Sequence logos: a new way to display consensus sequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945184

Expression of the multiple sclerosis-associated MHC class II Allele HLA-DRB1*1501 is regulated by vitamin D.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945184

Multiple genetic loci for bone mineral density and fractures

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945184

The multiple sclerosis whole blood mRNA transcriptome and genetic associations indicate dysregulation of specific T cell pathways in pathogenesis

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945184

A fast and symmetric DUST implementation to mask low-complexity DNA sequences

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20736230

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GR.107920.110

1 reference

31 July 2017

1 reference

31 July 2017

1 reference