(Q34154311)

31 July 2017

title

Identification of the binding sites of regulatory proteins in bacterial genomes (English)

1 reference

31 July 2017

3

Carol Gross

1 reference

31 July 2017

4

Eric D Siggia

1 reference

31 July 2017

Hao Li

1

1 reference

31 July 2017

Virgil Rhodius

series ordinal

2

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31 July 2017

language of work or name

English

0 references

publication date

14 August 2002

1 reference

Proceedings of the National Academy of Sciences of the United States of America

31 July 2017

published in

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31 July 2017

volume

99

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31 July 2017

issue

18

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31 July 2017

page(s)

11772-11777

1 reference

The evolution of DNA regulatory regions for proteo-gamma bacteria by interspecies comparisons

31 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129344

Comparative gene expression profiles following UV exposure in wild-type and SOS-deficient Escherichia coli

28 July 2018

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Phylogenetic footprinting of transcription factor binding sites in proteobacterial genomes

28 July 2018

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RegulonDB (version 3.2): transcriptional regulation and operon organization in Escherichia coli K-12

28 July 2018

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Nitrogen regulatory protein C-controlled genes of Escherichia coli: scavenging as a defense against nitrogen limitation

28 July 2018

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Building a dictionary for genomes: identification of presumptive regulatory sites by statistical analysis

28 July 2018

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Discovering regulatory elements in non-coding sequences by analysis of spaced dyads

28 July 2018

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Clustering gene expression patterns

28 July 2018

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Identifying DNA and protein patterns with statistically significant alignments of multiple sequences

28 July 2018

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The functional and regulatory roles of sigma factors in transcription

28 July 2018

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Cluster analysis and display of genome-wide expression patterns

28 July 2018

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A comprehensive library of DNA-binding site matrices for 55 proteins applied to the complete Escherichia coli K-12 genome

28 July 2018

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Finding DNA regulatory motifs within unaligned noncoding sequences clustered by whole-genome mRNA quantitation

28 July 2018

1 reference

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Extracting regulatory sites from the upstream region of yeast genes by computational analysis of oligonucleotide frequencies.

28 July 2018

1 reference

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28 July 2018

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Detecting subtle sequence signals: a Gibbs sampling strategy for multiple alignment

28 July 2018

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The value of prior knowledge in discovering motifs with MEME

28 July 2018

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Comparison of the consensus sequence flanking translational start sites in Drosophila and vertebrates

28 July 2018

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Selection of DNA binding sites by regulatory proteins. Statistical-mechanical theory and application to operators and promoters.

28 July 2018

1 reference

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Identifying protein-binding sites from unaligned DNA fragments

28 July 2018

1 reference

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The EcoCyc and MetaCyc databases

28 July 2018

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Probabilistic clustering of sequences: inferring new bacterial regulons by comparative genomics

21 January 2018

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Inferring regulatory elements from a whole genome. An analysis of Helicobacter pylori sigma(80) family of promoter signals.

21 January 2018

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A statistical method for finding transcription factor binding sites.

21 January 2018

1 reference

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Conservation of DNA Regulatory Motifs and Discovery of New Motifs in Microbial Genomes

28 October 2018

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A web site for the computational analysis of yeast regulatory sequences

21 January 2018

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MultiFun, a multifunctional classification scheme for Escherichia coli K-12 gene products

21 January 2018

1 reference

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21 January 2018

Identifiers

DOI

10.1073/PNAS.112341999

1 reference

31 July 2017

0 references

1 reference

31 July 2017

1 reference