(Q34171512)

31 July 2017

title

The genomic rate of molecular adaptation of the human influenza A virus (English)

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31 July 2017

influenza A virus

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2

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31 July 2017

3

Oliver G Pybus

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author name string

Samir Bhatt

series ordinal

1

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31 July 2017

language of work or name

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16 March 2011

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Molecular Biology and Evolution

31 July 2017

published in

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31 July 2017

volume

28

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31 July 2017

issue

9

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31 July 2017

page(s)

2443-2451

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Allele dynamics plots for the study of evolutionary dynamics in viral populations

31 July 2017

cites work

1 reference

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A maximum likelihood method for detecting directional evolution in protein sequences and its application to influenza A virus.

5 July 2018

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The genomic and epidemiological dynamics of human influenza A virus

5 July 2018

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Homologous recombination is very rare or absent in human influenza A virus

5 July 2018

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Highly conserved regions of influenza a virus polymerase gene segments are critical for efficient viral RNA packaging.

5 July 2018

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5 July 2018

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The genesis and spread of reassortment human influenza A/H3N2 viruses conferring adamantane resistance

5 July 2018

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Simultaneous amino acid substitutions at antigenic sites drive influenza A hemagglutinin evolution

5 July 2018

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Stochastic processes are key determinants of short-term evolution in influenza a virus

5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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Binding of the influenza A virus NS1 protein to PKR mediates the inhibition of its activation by either PACT or double-stranded RNA.

5 July 2018

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5 July 2018

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Pathogenicity of influenza viruses with genes from the 1918 pandemic virus: functional roles of alveolar macrophages and neutrophils in limiting virus replication and mortality in mice

5 July 2018

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Comparisons of dN/dS are time dependent for closely related bacterial genomes

5 July 2018

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Functional constraints of influenza A virus epitopes limit escape from cytotoxic T lymphocytes

5 July 2018

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Protection against multiple influenza A subtypes by vaccination with highly conserved nucleoprotein.

5 July 2018

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Detection of genome-scale ordered RNA structure (GORS) in genomes of positive-stranded RNA viruses: Implications for virus evolution and host persistence

5 July 2018

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High-resolution phylogenetic analysis of hepatitis C virus adaptation and its relationship to disease progression

5 July 2018

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Influenza type A in humans, mammals and birds: determinants of virus virulence, host-range and interspecies transmission.

5 July 2018

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Estimating the distribution of selection coefficients from phylogenetic data with applications to mitochondrial and viral DNA.

5 July 2018

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Differences in clinical features between influenza A H1N1, A H3N2, and B in adult patients

5 July 2018

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Adaptive protein evolution in Drosophila

5 July 2018

1 reference

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Positive and negative selection on the human genome

5 July 2018

1 reference

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Statistical methods for detecting molecular adaptation

5 July 2018

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Receptor binding and membrane fusion in virus entry: the influenza hemagglutinin

5 July 2018

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Antigenic drift in the influenza A virus (H3N2) nucleoprotein and escape from recognition by cytotoxic T lymphocytes

5 July 2018

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Balanced hemagglutinin and neuraminidase activities are critical for efficient replication of influenza A virus

5 July 2018

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ESPript: analysis of multiple sequence alignments in PostScript

5 July 2018

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Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene

5 July 2018

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Long term trends in the evolution of H(3) HA1 human influenza type A

5 July 2018

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Statistical analysis of nucleotide sequences of the hemagglutinin gene of human influenza A viruses

5 July 2018

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5 July 2018

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The epitopes of influenza nucleoprotein recognized by cytotoxic T lymphocytes can be defined with short synthetic peptides

5 July 2018

1 reference

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Adaptive protein evolution at the Adh locus in Drosophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3163432

Positive Darwinian evolution in human influenza A viruses

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3163432

Population genetics of polymorphism and divergence

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3163432

Controlling type-I error of the McDonald-Kreitman test in genomewide scans for selection on noncoding DNA.

5 July 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSR044

Detecting natural selection in RNA virus populations using sequence summary statistics

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSR044

Adamantane resistance among influenza A viruses isolated early during the 2005-2006 influenza season in the United States

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSR044

The cost of inbreeding in Arabidopsis.

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSR044

The McDonald-Kreitman test and slightly deleterious mutations.

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSR044

QuickTree: building huge Neighbour-Joining trees of protein sequences.

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSR044

Phylogenetic Evidence for Deleterious Mutation Load in RNA Viruses and Its Contribution to Viral Evolution

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSR044

Adaptation in the env gene of HIV-1 and evolutionary theories of disease progression

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSR044

Differing virulence of H1N1 and H3N2 influenza strains

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSR044

Maximum likelihood estimation on large phylogenies and analysis of adaptive evolution in human influenza virus A.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSR044

21 January 2018

Identifiers

DOI

10.1093/MOLBEV/MSR044

1 reference

31 July 2017

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31 July 2017

1 reference