(Q34173491)

31 July 2017

title

Predicting sequence and structural specificities of RNA binding regions recognized by splicing factor SRSF1. (English)

1 reference

31 July 2017

Xin Wang

1

1 reference

31 July 2017

Liran Juan

2

1 reference

31 July 2017

Junjie Lv

3

1 reference

31 July 2017

Kejun Wang

4

1 reference

31 July 2017

Jeremy R Sanford

5

1 reference

31 July 2017

Yunlong Liu

6

1 reference

31 July 2017

language of work or name

English

0 references

publication date

23 December 2011

1 reference

31 July 2017

1 reference

31 July 2017

volume

12 Suppl 5

1 reference

31 July 2017

page(s)

S8

1 reference

describes a project that uses

31 July 2017

Cytoscape

object named as

Cytoscape

2 references

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

based on heuristic

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

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Genome-wide analysis of PTB-RNA interactions reveals a strategy used by the general splicing repressor to modulate exon inclusion or skipping

5 July 2018

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5 July 2018

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5 July 2018

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Splicing factor SFRS1 recognizes a functionally diverse landscape of RNA transcripts

5 July 2018

1 reference

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Identification of nuclear and cytoplasmic mRNA targets for the shuttling protein SF2/ASF

5 July 2018

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Adaptable molecular interactions guide phosphorylation of the SR protein ASF/SF2 by SRPK1

5 July 2018

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5 July 2018

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A sliding docking interaction is essential for sequential and processive phosphorylation of an SR protein by SRPK1

5 July 2018

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The gene encoding the splicing factor SF2/ASF is a proto-oncogene

5 July 2018

1 reference

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Using RNA secondary structures to guide sequence motif finding towards single-stranded regions

5 July 2018

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Sequence-specific binding of single-stranded RNA: is there a code for recognition?

5 July 2018

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5 July 2018

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Multiple roles of arginine/serine-rich splicing factors in RNA processing.

5 July 2018

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5 July 2018

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5 July 2018

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RNA folding affects the recruitment of SR proteins by mouse and human polypurinic enhancer elements in the fibronectin EDA exon

5 July 2018

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CLIP identifies Nova-regulated RNA networks in the brain

5 July 2018

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Cytoscape: a software environment for integrated models of biomolecular interaction networks

5 July 2018

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A novel bipartite splicing enhancer modulates the differential processing of the human fibronectin EDA exon

5 July 2018

1 reference

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A subset of SR proteins activates splicing of the cardiac troponin T alternative exon by direct interactions with an exonic enhancer

5 July 2018

1 reference

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Fitting a mixture model by expectation maximization to discover motifs in biopolymers

5 July 2018

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The human splicing factors ASF/SF2 and SC35 possess distinct, functionally significant RNA binding specificities

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287504

The equilibrium partition function and base pair binding probabilities for RNA secondary structure

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287504

An RNA map predicting Nova-dependent splicing regulation

5 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2164-12-S5-S8

RNA secondary structure analysis using the Vienna RNA package.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287504

10.1186/1471-2164-12-S5-S8

28 October 2018

Identifiers

DOI

1 reference

31 July 2017

1 reference

31 July 2017

1 reference