(Q34175951)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11423431%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

title

Structure and hydration of the DNA-human topoisomerase I covalent complex (English)

1 reference

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8 November 2019

1

1 reference

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8 November 2019

author name string

Castrignanò T

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11423431%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

Desideri A

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11423431%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

language of work or name

English

0 references

publication date

1 July 2001

1 reference

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8 November 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11423431%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

volume

81

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11423431%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

page(s)

490-500

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11423431%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11423431%20AND%20SRC:MED&resulttype=core&format=json

NMR and molecular dynamics studies of the hydration of a zinc finger-DNA complex

8 November 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

Structure and hydration of BamHI DNA recognition site: a molecular dynamics investigation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

Hydration dynamics of the collagen triple helix by NMR.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

Novel insights into catalytic mechanism from a crystal structure of human topoisomerase I in complex with DNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

Structure, interaction, dynamics and solvent effects on the DNA-EcoRI complex in aqueous solution from molecular dynamics simulation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

Structural flexibility in human topoisomerase I revealed in multiple non-isomorphous crystal structures

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

Molecular dynamics simulations of the complex between human U1A protein and hairpin II of U1 small nuclear RNA and of free RNA in solution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

The structure of a Staphylococcus aureus leucocidin component (LukF-PV) reveals the fold of the water-soluble species of a family of transmembrane pore-forming toxins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

Hydration-coupled dynamics in proteins studied by neutron scattering and NMR: the case of the typical EF-hand calcium-binding parvalbumin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

Protein-DNA interactions: A structural analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

Water molecules in DNA recognition II: a molecular dynamics view of the structure and hydration of the trp operator

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

A model for the mechanism of human topoisomerase I

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

Crystal structures of human topoisomerase I in covalent and noncovalent complexes with DNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

A 5-nanosecond molecular dynamics trajectory for B-DNA: analysis of structure, motions, and solvation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

Identification of mutations at DNA topoisomerase I responsible for camptothecin resistance.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

Hydration and DNA recognition by homeodomains

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

Direct observation of protein solvation and discrete disorder with experimental crystallographic phases

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

Identification of a mutant human topoisomerase I with intact catalytic activity and resistance to 9-nitro-camptothecin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

A camptothecin-resistant DNA topoisomerase I mutant exhibits altered sensitivities to other DNA topoisomerase poisons

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

Crystal structure of trp repressor/operator complex at atomic resolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

Molecular cloning of a cDNA of a camptothecin-resistant human DNA topoisomerase I and identification of mutation sites

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

Detection of topoisomerase I gene point mutation in CPT-11 resistant lung cancer cell line

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

Substitutions of Asn-726 in the active site of yeast DNA topoisomerase I define novel mechanisms of stabilizing the covalent enzyme-DNA intermediate.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

Domain interactions affecting human DNA topoisomerase I catalysis and camptothecin sensitivity.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

Molecular dynamics studies of U1A-RNA complexes

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

DNA sequence selectivity of topoisomerases and topoisomerase poisons.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

Mechanisms of camptothecin resistance in yeast DNA topoisomerase I mutants.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

Saintopin, a dual inhibitor of DNA topoisomerases I and II, as a probe for drug-enzyme interactions.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

Analysis of solvent structure in proteins using neutron D2O-H2O solvent maps: pattern of primary and secondary hydration of trypsin

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301528

The influence of a protein on water dynamics in its vicinity investigated by molecular dynamics simulation

28 October 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975716-5

The Camptothecin-Resistant Topoisomerase I Mutant F361S Is Cross-Resistant to Antitumor Rebeccamycin Derivatives. A Model for Topoisomerase I Inhibition by Indolocarbazoles†

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975716-5

A Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic Molecules

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975716-5

Particle mesh Ewald: An N⋅log(N) method for Ewald sums in large systems

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975716-5

Intragenic suppressors of mutant DNA topoisomerase I-induced lethality diminish enzyme binding of DNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975716-5

Increased camptothecin toxicity induced in mammalian cells expressing Saccharomyces cerevisiae DNA topoisomerase I

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975716-5

Wet and dry interfaces: the role of solvent in protein-protein and protein-DNA recognition

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975716-5

Involvement of amino acids 361 to 364 of human topoisomerase I in camptothecin resistance and enzyme catalysis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975716-5

Molecular dynamics simulation of solvated azurin: Correlation between surface solvent accessibility and water residence times

7 January 2021

2 references

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975716-5

7 January 2021

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975716-5

inferred from DOI database lookup

7 January 2021

based on heuristic

Alterations in the catalytic activity of yeast DNA topoisomerase I result in cell cycle arrest and cell death

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975716-5

Protein hydration in aqueous solution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975716-5

Mechanism of action of eukaryotic DNA topoisomerase I and drugs targeted to the enzyme

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975716-5

Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975716-5

The role of water in protein-DNA interactions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975716-5

Camptothecin resistance from a single mutation changing glycine 363 of human DNA topoisomerase I to cysteine

7 January 2021

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/11423431

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/S0006-3495(01)75716-5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11423431%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11423431%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

1 reference