(Q34176805)

31 July 2017

title

Complete genome sequence of Paludibacter propionicigenes type strain (WB4). (English)

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whole genome sequencing

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20

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26

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30

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33

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Alla Lapidus

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Hans-Peter Klenk

34

Hans-Peter Klenk

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Philip Hugenholtz

32

Philip Hugenholtz

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Tanja Woyke

28

Tanja Woyke

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Evelyne Brambilla

24

Evelyne Brambilla

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Sam Pitluck

12

Sam Pitluck

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31

Victor Markowitz

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17

Amrita Pati

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Jan-Fang Cheng

8

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Cliff Han

10

Cliff Han

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Konstantinos Mavromatis

15

Konstantinos Mavromatis

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11

Lynne Goodwin

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Natalia Mikhailova

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Krishna Palaniappan

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Loren Hauser

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4

Matt Nolan

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Amy Chen

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5

Susan Lucas

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Cynthia D Jeffries

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John C Detter

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Manfred Rohde

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6

Nancy Hammon

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Yun-Juan Chang

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7

Shweta Deshpande

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9

Roxane Tapia

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13

Konstantinos Liolios

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1

Sabine Gronow

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James Bristow

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Christine Munk

2

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31 July 2017

publication date

20 February 2011

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Standards in genomic sciences

31 July 2017

published in

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31 July 2017

volume

4

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31 July 2017

issue

1

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31 July 2017

page(s)

36-44

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https://scigraph.springernature.com/pub.10.4056/sigs.1503846

31 July 2017

exact match

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cites work

Diversity and abundance of the bacterial 16S rRNA gene sequences in forestomach of alpacas (Lama pacos) and sheep (Ovis aries).

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En route to a genome-based classification of Archaea and Bacteria?

5 July 2018

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Prodigal: prokaryotic gene recognition and translation initiation site identification

5 July 2018

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A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea

5 July 2018

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The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata

5 July 2018

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IMG ER: a system for microbial genome annotation expert review and curation

5 July 2018

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A rapid bootstrap algorithm for the RAxML Web servers

5 July 2018

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Determination of the genome sequence of Porphyromonas gingivalis strain ATCC 33277 and genomic comparison with strain W83 revealed extensive genome rearrangements in P. gingivalis

5 July 2018

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The minimum information about a genome sequence (MIGS) specification

5 July 2018

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Velvet: algorithms for de novo short read assembly using de Bruijn graphs

5 July 2018

1 reference

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Evolution of symbiotic bacteria in the distal human intestine

5 July 2018

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Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

5 July 2018

1 reference

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Paludibacter propionicigenes gen. nov., sp. nov., a novel strictly anaerobic, Gram-negative, propionate-producing bacterium isolated from plant residue in irrigated rice-field soil in Japan

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072083

Multiple sequence alignment using partial order graphs

5 July 2018

1 reference

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Gene ontology: tool for the unification of biology

5 July 2018

1 reference

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Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072083

Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

5 July 2018

1 reference

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Phylogeny of numerically abundant culturable anaerobic bacteria associated with degradation of rice plant residue in Japanese paddy field soil

5 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.4056%2FSIGS.1503846

An algorithm for suffix stripping

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.4056%2FSIGS.1503846

GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.4056%2FSIGS.1503846

How many bootstrap replicates are necessary?

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072083

28 October 2018

Identifiers

DOI

10.4056/SIGS.1503846

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Dimensions Publication ID

31 July 2017

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31 July 2017

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