(Q34183513)

31 July 2017

Asymmetric structural motions of the homomeric alpha7 nicotinic receptor ligand binding domain revealed by molecular dynamics simulation (English)

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31 July 2017

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5

J Andrew McCammon

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31 July 2017

Richard H Henchman

1

1 reference

31 July 2017

Hai-Long Wang

series ordinal

2

1 reference

31 July 2017

Steven M Sine

series ordinal

3

1 reference

31 July 2017

Palmer Taylor

series ordinal

4

1 reference

31 July 2017

language of work or name

English

0 references

publication date

1 November 2003

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31 July 2017

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31 July 2017

85

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31 July 2017

5

1 reference

31 July 2017

3007-3018

1 reference

describes a project that uses

31 July 2017

molecular dynamics simulation

1 reference

based on heuristic

inferred from title

cites work

Raster3D: photorealistic molecular graphics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

Structure and gating mechanism of the acetylcholine receptor pore

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

Nicotinic acetylcholine receptors: from structure to brain function

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

The nicotinic receptor ligand binding domain

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

The structure of the M2 channel-lining segment from the nicotinic acetylcholine receptor

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

Residues in the epsilon subunit of the nicotinic acetylcholine receptor interact to confer selectivity of waglerin-1 for the alpha-epsilon subunit interface site

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

Lysine scanning mutagenesis delineates structural model of the nicotinic receptor ligand binding domain

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

Structural model of nicotinic acetylcholine receptor isotypes bound to acetylcholine and nicotine

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

Emerging structure of the nicotinic acetylcholine receptors

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

Allosteric mechanisms in normal and pathological nicotinic acetylcholine receptors

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

Crystal structure of an ACh-binding protein reveals the ligand-binding domain of nicotinic receptors

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

Nicotinic receptors at the amino acid level

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

Improved secondary structure predictions for a nicotinic receptor subunit: incorporation of solvent accessibility and experimental data into a two-dimensional representation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

From ab initio quantum mechanics to molecular neurobiology: a cation-pi binding site in the nicotinic receptor

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

Kinked-helices model of the nicotinic acetylcholine receptor ion channel and its complexes with blockers: simulation by the Monte Carlo minimization method

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

Topology of ligand binding sites on the nicotinic acetylcholine receptor

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

Molecular modelling of the nicotinic acetylcholine receptor transmembrane region in the open state

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

VMD: visual molecular dynamics

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

Comparative protein modelling by satisfaction of spatial restraints

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

Stable expression and pharmacological properties of the human α7 nicotinic acetylcholine receptor

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

A computational procedure for determining energetically favorable binding sites on biologically important macromolecules

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

WHAT IF: a molecular modeling and drug design program

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

Coupling of agonist binding to channel gating in the GABA(A) receptor

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

Ligand-receptor interaction at the neural nicotinic acetylcholine binding site: a theoretical model.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

Activation of the nicotinic acetylcholine receptor involves a switch in conformation of the alpha subunits.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

Models of the extracellular domain of the nicotinic receptors and of agonist- and Ca2+-binding sites

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

A glia-derived acetylcholine-binding protein that modulates synaptic transmission.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

The nicotinic acetylcholine receptor: from molecular model to single-channel conductance.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

Nicotinic acetylcholine receptor at 4.6 A resolution: transverse tunnels in the channel wall.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

Conserved tyrosines in the alpha subunit of the nicotinic acetylcholine receptor stabilize quaternary ammonium groups of agonists and curariform antagonists.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303578

Molecular dynamics with coupling to an external bath

28 October 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974720-1

CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974720-1

Allosteric receptors after 30 years

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974720-1

Identification of a new component of the agonist binding site of the nicotinic alpha 7 homooligomeric receptor

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974720-1

Iterative partial equalization of orbital electronegativity—a rapid access to atomic charges

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974720-1

Nicotinic receptors in wonderland

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974720-1

Comparison of simple potential functions for simulating liquid water

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974720-1

PROCHECK: a program to check the stereochemical quality of protein structures

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974720-1

Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974720-1

Prediction of the secondary structure of the nicotinic acetylcholine receptor nontransmembrane regions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974720-1

Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974720-1

A smooth particle mesh Ewald method

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974720-1

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1016/S0006-3495(03)74720-1

1 reference

release_6wsnlbjyfzefber7k55o6re7ci

31 July 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/6wsnlbjyfzefber7k55o6re7ci

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMCID

1303578

1 reference

31 July 2017

1 reference