(Q34207786)

31 July 2017

title

Telomere-targeted retrotransposons in the rice blast fungus Magnaporthe oryzae: agents of telomere instability (English)

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31 July 2017

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John H Starnes

1

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31 July 2017

David W Thornbury

2

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31 July 2017

Olga S Novikova

3

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31 July 2017

Cathryn J Rehmeyer

4

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31 July 2017

Mark L Farman

5

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31 July 2017

language of work or name

English

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publication date

23 March 2012

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31 July 2017

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31 July 2017

volume

191

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31 July 2017

issue

2

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31 July 2017

page(s)

389-406

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Telomere hypervariability in Magnaporthe oryzae

31 July 2017

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1 reference

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The subtelomere of Oryza sativa chromosome 3 short arm as a hot bed of new gene origination in rice

5 July 2018

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5 July 2018

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Telomeres in the rice blast fungus Magnaporthe oryzae: the world of the end as we know it.

5 July 2018

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5 July 2018

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5 July 2018

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Organization of chromosome ends in the rice blast fungus, Magnaporthe oryzae

5 July 2018

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Genomic organization of the Drosophila telomere retrotransposable elements

5 July 2018

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5 July 2018

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Telomere-specific non-LTR retrotransposons and telomere maintenance in the silkworm, Bombyx mori

5 July 2018

1 reference

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The PD-(D/E)XK superfamily revisited: identification of new members among proteins involved in DNA metabolism and functional predictions for domains of (hitherto) unknown function

5 July 2018

1 reference

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Toward closing rice telomere gaps: mapping and sequence characterization of rice subtelomere regions

5 July 2018

1 reference

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Analysis of 5' junctions of human LINE-1 and Alu retrotransposons suggests an alternative model for 5'-end attachment requiring microhomology-mediated end-joining

5 July 2018

1 reference

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The genome sequence of the rice blast fungus Magnaporthe grisea

5 July 2018

1 reference

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Sequencing and comparison of yeast species to identify genes and regulatory elements

5 July 2018

1 reference

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Genetic diversity in yeast assessed with whole-genome oligonucleotide arrays

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

Evolution and organization of a highly dynamic, subtelomeric helicase gene family in the rice blast fungus Magnaporthe grisea

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

A quantitative assay for telomere protection in Saccharomyces cerevisiae

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

Saccharomyces Rrm3p, a 5' to 3' DNA helicase that promotes replication fork progression through telomeric and subtelomeric DNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

Potential multiple endonuclease functions and a ribonuclease H encoded in retroposon genomes

5 July 2018

1 reference

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Ancient lineages of non-LTR retrotransposons in the primitive eukaryote, Giardia lamblia

5 July 2018

1 reference

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Three retrotransposon families in the genome of Giardia lamblia: two telomeric, one dead

5 July 2018

1 reference

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Comparative sequencing of a multicopy subtelomeric region containing olfactory receptor genes reveals multiple interactions between non-homologous chromosomes

5 July 2018

1 reference

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Terminal retrotransposons activate a subtelomeric white transgene at the 2L telomere in Drosophila.

5 July 2018

1 reference

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High levels of sequence polymorphism and linkage disequilibrium at the telomere of 12q: implications for telomere biology and human evolution.

5 July 2018

1 reference

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Identification of the endonuclease domain encoded by R2 and other site-specific, non-long terminal repeat retrotransposable elements

5 July 2018

1 reference

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The age and evolution of non-LTR retrotransposable elements

5 July 2018

1 reference

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The heterochromatin protein 1 prevents telomere fusions in Drosophila

5 July 2018

1 reference

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Structure of the Chlorella Zepp retrotransposon: nested Zepp clusters in the genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

Antigenic variation in malaria: in situ switching, relaxed and mutually exclusive transcription of var genes during intra-erythrocytic development in Plasmodium falciparum

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

Consed: a graphical tool for sequence finishing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

Base-calling of automated sequencer traces using phred. II. Error probabilities

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

Base-calling of automated sequencer traces using phred. I. Accuracy assessment

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

Chromosome ends: all the same under their caps.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

Telomere variation in Xenopus laevis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

Zepp, a LINE-like retrotransposon accumulated in the Chlorella telomeric region

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

A new family of site-specific retrotransposons, SART1, is inserted into telomeric repeats of the silkworm, Bombyx mori

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

Superfamily of alpha-galactosidase MEL genes of the Saccharomyces sensu stricto species complex

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

Penelope, a new family of transposable elements and its possible role in hybrid dysgenesis in Drosophila virilis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

Downstream 28S gene sequences on the RNA template affect the choice of primer and the accuracy of initiation by the R2 reverse transcriptase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: a mechanism for non-LTR retrotransposition

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

A new non-LTR retrotransposon provides evidence for multiple distinct site-specific elements in Crithidia fasciculata miniexon arrays

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

Structural analysis of TRAS1, a novel family of telomeric repeat-associated retrotransposons in the silkworm, Bombyx mori

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

Single-stranded DNA arising at telomeres in cdc13 mutants may constitute a specific signal for the RAD9 checkpoint

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

RNA template requirements for target DNA-primed reverse transcription by the R2 retrotransposable element

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

Long tandem arrays of complex repeat units in Chironomus telomeres

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

A spontaneously opened ring chromosome of Drosophila melanogaster has acquired He-T DNA sequences at both new telomeres

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

A telomeric sequence in the RNA of Tetrahymena telomerase required for telomere repeat synthesis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

SLACS retrotransposon from Trypanosoma brucei gambiense is similar to mammalian LINEs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

A rapidly rearranging retrotransposon within the miniexon gene locus of Crithidia fasciculata

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

Addition of telomere-associated HeT DNA sequences "heals" broken chromosome ends in Drosophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

In vivo alteration of telomere sequences and senescence caused by mutated Tetrahymena telomerase RNAs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

Frequent transpositions of Drosophila melanogaster HeT-A transposable elements to receding chromosome ends

5 July 2018

1 reference

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Targeted cloning of fungal telomeres.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

Transposition of MINE, a composite retrotransposon, in the avirulence gene ACE1 of the rice blast fungus Magnaporthe grisea.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

HP1 controls telomere capping, telomere elongation, and telomere silencing by two different mechanisms in Drosophila.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

Genomic analysis of Drosophila melanogaster telomeres: full-length copies of HeT-A and TART elements at telomeres

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

Fish retroposons related to the Penelope element of Drosophila virilis define a new group of retrotransposable elements

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

The diversity of retrotransposons in the yeast Cryptococcus neoformans

28 October 2018

1 reference

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Frequent ectopic recombination of virulence factor genes in telomeric chromosome clusters of P. falciparum

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

DNA organization and length polymorphism at the 2L telomeric region of Anopheles gambiae

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

The Saccharomyces retrotransposon Ty5 integrates preferentially into regions of silent chromatin at the telomeres and mating loci

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3374306

Chromosomal polymorphism of MEL genes in some populations of Saccharomyces cerevisiae

28 October 2018

1 reference

12 December 2020

End-to-end template jumping by the reverse transcriptase encoded by the R2 retrotransposon

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12 December 2020

Analysis of Trypanosoma brucei vsg expression site switching in vitro

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12 December 2020

Pyricularia grisea Isolates Causing Gray Leaf Spot on Perennial Ryegrass (Lolium perenne) in the United States: Relationship to P. grisea Isolates from Other Host Plants

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12 December 2020

Human l1 retrotransposition is associated with genetic instability in vivo

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12 December 2020

Stable length polymorphism of up to 260 kb at the tip of the short arm of human chromosome 16

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12 December 2020

Removal of polysaccharides from plant DNA by ethanol precipitation

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12 December 2020

DNA degradation at unprotected telomeres in yeast is regulated by the CDK1 (Cdc28/Clb) cell-cycle kinase

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12 December 2020

Polymeric SUC genes in natural populations of Saccharomyces cerevisiae

1 reference

12 December 2020

Antigenic variation by telomeric recombination of major-surface-glycoprotein genes of Pneumocystis carinii

1 reference

12 December 2020

10.1534/GENETICS.111.137950

Identifiers

DOI

1 reference

31 July 2017

1 reference

31 July 2017

1 reference