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Enhancers as information integration hubs in development: lessons from genomics.
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Europe PubMed Central
PMC publication ID
5064438
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22487374%20AND%20SRC:MED&resulttype=core&format=json
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28 January 2020
title
Enhancers as information integration hubs in development: lessons from genomics
(English)
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stated in
Europe PubMed Central
PMC publication ID
5064438
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22487374%20AND%20SRC:MED&resulttype=core&format=json
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28 January 2020
main subject
genomics
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author
Christa Buecker
series ordinal
1
1 reference
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Europe PubMed Central
PMC publication ID
5064438
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22487374%20AND%20SRC:MED&resulttype=core&format=json
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28 January 2020
author name string
Joanna Wysocka
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2
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Europe PubMed Central
PMC publication ID
5064438
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22487374%20AND%20SRC:MED&resulttype=core&format=json
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28 January 2020
publication date
7 April 2012
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Europe PubMed Central
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5064438
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retrieved
28 January 2020
published in
Trends in Genetics
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5064438
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28 January 2020
volume
28
1 reference
stated in
Europe PubMed Central
PMC publication ID
5064438
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22487374%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 January 2020
issue
6
1 reference
stated in
Europe PubMed Central
PMC publication ID
5064438
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22487374%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 January 2020
page(s)
276-284
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Europe PubMed Central
PMC publication ID
5064438
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22487374%20AND%20SRC:MED&resulttype=core&format=json
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28 January 2020
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6 July 2018
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Nucleosome dynamics define transcriptional enhancers
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Direct conversion of fibroblasts to functional neurons by defined factors
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6 July 2018
Enhancers: the abundance and function of regulatory sequences beyond promoters
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6 July 2018
Transcriptional competence and the active marking of tissue-specific enhancers by defined transcription factors in embryonic and induced pluripotent stem cells
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6 July 2018
Combinatorial binding predicts spatio-temporal cis-regulatory activity
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6 July 2018
A model for all genomes: the role of transcription factories
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6 July 2018
Comprehensive mapping of long-range interactions reveals folding principles of the human genome
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6 July 2018
A positive but complex association between meiotic double-strand break hotspots and open chromatin in Saccharomyces cerevisiae
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6 July 2018
H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions
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6 July 2018
Cis-ruption mechanisms: disruption of cis-regulatory control as a cause of human genetic disease
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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6 July 2018
Histone modifications at human enhancers reflect global cell-type-specific gene expression
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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6 July 2018
ChIP-seq accurately predicts tissue-specific activity of enhancers
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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6 July 2018
Epigenetic reprogramming and induced pluripotency
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stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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6 July 2018
Chromatin insulators: regulatory mechanisms and epigenetic inheritance
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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6 July 2018
Evo-Devo and an Expanding Evolutionary Synthesis: A Genetic Theory of Morphological Evolution
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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6 July 2018
Integration of external signaling pathways with the core transcriptional network in embryonic stem cells
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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6 July 2018
New cell lines from mouse epiblast share defining features with human embryonic stem cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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6 July 2018
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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6 July 2018
Histone replacement marks the boundaries of cis-regulatory domains
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stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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6 July 2018
Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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6 July 2018
FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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6 July 2018
Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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6 July 2018
Transcriptional Regulatory Elements in the Human Genome
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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6 July 2018
A bivalent chromatin structure marks key developmental genes in embryonic stem cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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6 July 2018
Core transcriptional regulatory circuitry in human embryonic stem cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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6 July 2018
Transcriptional regulation and the role of diverse coactivators in animal cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
retrieved
6 July 2018
A global control region defines a chromosomal regulatory landscape containing the HoxD cluster
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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6 July 2018
Asymmetric and node-specific nodal expression patterns are controlled by two distinct cis-acting regulatory elements
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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6 July 2018
Germline regulatory element of Oct-4 specific for the totipotent cycle of embryonal cells
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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6 July 2018
Enhancers: from developmental genetics to the genetics of common human disease.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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28 October 2018
A precarious balance: pluripotency factors as lineage specifiers.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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28 October 2018
Nodal signaling recruits the histone demethylase Jmjd3 to counteract polycomb-mediated repression at target genes.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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28 October 2018
Transposable elements have rewired the core regulatory network of human embryonic stem cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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28 October 2018
The origin of digits: expression patterns versus regulatory mechanisms.
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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28 October 2018
Identification and characterization of enhancers controlling the inflammatory gene expression program in macrophages.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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28 October 2018
Functional analysis of chicken Sox2 enhancers highlights an array of diverse regulatory elements that are conserved in mammals.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5064438
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28 October 2018
Identifiers
DOI
10.1016/J.TIG.2012.02.008
1 reference
stated in
Europe PubMed Central
PMC publication ID
5064438
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22487374%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 January 2020
PMC publication ID
5064438
1 reference
stated in
Europe PubMed Central
PMC publication ID
5064438
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22487374%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 January 2020
PubMed publication ID
22487374
1 reference
stated in
Europe PubMed Central
PMC publication ID
5064438
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22487374%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 January 2020
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