(Q34294332)

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Dynamic flux balance analysis of the metabolism of Saccharomyces cerevisiae during the shift from fully respirative or respirofermentative metabolic states to anaerobiosis

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Europe PubMed Central

PubMed publication ID

1 August 2017

Dynamic flux balance analysis of the metabolism of Saccharomyces cerevisiae during the shift from fully respirative or respirofermentative metabolic states to anaerobiosis (English)

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Europe PubMed Central

PubMed publication ID

1 August 2017

Saccharomyces cerevisiae

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Marilyn G Wiebe

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Marilyn Wiebe

2

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Merja Penttilä

3

object named as

Merja Penttilä

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

1

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Paula Jouhten

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Europe PubMed Central

PubMed publication ID

1 August 2017

language of work or name

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publication date

18 June 2012

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Europe PubMed Central

PubMed publication ID

1 August 2017

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Europe PubMed Central

PubMed publication ID

1 August 2017

279

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Europe PubMed Central

PubMed publication ID

1 August 2017

18

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

3338-3354

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

Factors involved in anaerobic growth of Saccharomyces cerevisiae

1 reference

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Flux distributions in anaerobic, glucose-limited continuous cultures of Saccharomyces cerevisiae.

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Influence of oxygen on the growth of Saccharomyces cerevisiae in continuous culture

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Physiological, biochemical, and mathematical studies of micro-aerobic continuous ethanol fermentation by Saccharomyces cerevisiae. I: hysteresis, oscillations, and maximum specific ethanol productivities in chemostat culture.

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Metabolic flux analysis of RQ-controlled microaerobic ethanol production by Saccharomyces cerevisiae

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Low oxygen levels as a trigger for enhancement of respiratory metabolism in Saccharomyces cerevisiae

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Central carbon metabolism of Saccharomyces cerevisiae in anaerobic, oxygen-limited and fully aerobic steady-state conditions and following a shift to anaerobic conditions

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Oxygen dependence of metabolic fluxes and energy generation of Saccharomyces cerevisiae CEN.PK113-1A.

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Transcriptional responses of Saccharomyces cerevisiae to shift from respiratory and respirofermentative to fully fermentative metabolism

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New insights into the Saccharomyces cerevisiae fermentation switch: dynamic transcriptional response to anaerobicity and glucose-excess.

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Dynamics of glycolytic regulation during adaptation of Saccharomyces cerevisiae to fermentative metabolism

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Genome-scale consequences of cofactor balancing in engineered pentose utilization pathways in Saccharomyces cerevisiae

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A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology

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Further developments towards a genome-scale metabolic model of yeast

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Dynamic flux balance analysis of diauxic growth in Escherichia coli

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Modeling of yeast metabolism and process dynamics in batch fermentation.

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Genome-scale analysis of Saccharomyces cerevisiae metabolism and ethanol production in fed-batch culture

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Steady-state and dynamic flux balance analysis of ethanol production by Saccharomyces cerevisiae.

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Application of dynamic flux balance analysis to an industrial Escherichia coli fermentation.

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The effects of alternate optimal solutions in constraint-based genome-scale metabolic models

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Yeast mitochondrial metabolism: from in vitro to in situ quantitative study.

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Transcriptome meets metabolome: hierarchical and metabolic regulation of the glycolytic pathway

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Stoichiometry and compartmentation of NADH metabolism inSaccharomyces cerevisiae

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Genomic analyses of anaerobically induced genes in Saccharomyces cerevisiae: functional roles of Rox1 and other factors in mediating the anoxic response.

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Functional analysis of the ALD gene family of Saccharomyces cerevisiae during anaerobic growth on glucose: the NADP+-dependent Ald6p and Ald5p isoforms play a major role in acetate formation

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Glucose regulates transcription in yeast through a network of signaling pathways

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How yeast re-programmes its transcriptional profile in response to different nutrient impulses

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Nutrient control of eukaryote cell growth: a systems biology study in yeast

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Bacterial adaptation through distributed sensing of metabolic fluxes

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Coordination of growth rate, cell cycle, stress response, and metabolic activity in yeast

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Transcription factor control of growth rate dependent genes in Saccharomyces cerevisiae: a three factor design

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Metabolic-state-dependent remodeling of the transcriptome in response to anoxia and subsequent reoxygenation in Saccharomyces cerevisiae.

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Anaerobiosis induces complex changes in sterol esterification pattern in the yeast Saccharomyces cerevisiae

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A member of the sugar transporter family, Stl1p is the glycerol/H+ symporter in Saccharomyces cerevisiae

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GUT2, a gene for mitochondrial glycerol 3-phosphate dehydrogenase of Saccharomyces cerevisiae

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HXT5 expression is determined by growth rates in Saccharomyces cerevisiae

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Inverse regulation of the yeast COX5 genes by oxygen and heme

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Metabolic engineering of Saccharomyces cerevisiae for production of novel lipid compounds

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Fatty acid metabolism in Saccharomyces cerevisiae

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Characteristics of sterol uptake in Saccharomyces cerevisiae

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Role of the non-respiratory pathways in the utilization of molecular oxygen by Saccharomyces cerevisiae

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Divergent evolution of pyrimidine biosynthesis between anaerobic and aerobic yeasts

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Isolation and inactivation of the nuclear gene encoding the rotenone-insensitive internal NADH: ubiquinone oxidoreductase of mitochondria from Saccharomyces cerevisiae

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Proton-coupled electron transfer in cytochrome oxidase.

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Coupling of proton and substrate translocation in the transport cycle of mitochondrial carriers

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Deletion or overexpression of mitochondrial NAD+ carriers in Saccharomyces cerevisiae alters cellular NAD and ATP contents and affects mitochondrial metabolism and the rate of glycolysis.

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Metabolic and transcriptional response to cofactor perturbations in Escherichia coli.

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Determination of the cytosolic free NAD/NADH ratio in Saccharomyces cerevisiae under steady-state and highly dynamic conditions

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Organization and regulation of the cytosolic NADH metabolism in the yeast Saccharomyces cerevisiae

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Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox

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Phenotypic mutation rates and the abundance of abnormal proteins in yeast

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Identifiers

10.1111/J.1742-4658.2012.08649.X

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

ResearchGate publication ID

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