(Q34295341)

1 August 2017

title

Integration of Hi-C and ChIP-seq data reveals distinct types of chromatin linkages (English)

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1 August 2017

7

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1 August 2017

Xun Lan

1

1 reference

1 August 2017

Heather Witt

2

1 reference

1 August 2017

Koichi Katsumura

3

1 reference

1 August 2017

Zhenqing Ye

4

1 reference

1 August 2017

Qianben Wang

5

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1 August 2017

Emery H Bresnick

6

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1 August 2017

Victor X Jin

8

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1 August 2017

language of work or name

English

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publication date

6 June 2012

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1 August 2017

published in

Nucleic Acids Research

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1 August 2017

volume

40

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1 August 2017

issue

16

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1 August 2017

page(s)

7690-7704

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Creative Commons Attribution-NonCommercial 3.0 Unported

1 August 2017

copyright license

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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Histone H3K27ac separates active from poised enhancers and predicts developmental state

6 July 2018

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Intra- and inter-chromosomal interactions correlate with CTCF binding genome wide.

6 July 2018

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6 July 2018

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Estrogen-mediated epigenetic repression of large chromosomal regions through DNA looping

6 July 2018

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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

6 July 2018

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A map of open chromatin in human pancreatic islets

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439894

Differential localization and independent acquisition of the H3K9me2 and H3K9me3 chromatin modifications in the Caenorhabditis elegans adult germ line

6 July 2018

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Discovering hematopoietic mechanisms through genome-wide analysis of GATA factor chromatin occupancy

6 July 2018

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6 July 2018

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6 July 2018

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A wave of nascent transcription on activated human genes

6 July 2018

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Comprehensive mapping of long-range interactions reveals folding principles of the human genome

6 July 2018

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Chromosome crosstalk in three dimensions.

6 July 2018

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BRG1 directly regulates nucleosome structure and chromatin looping of the alpha globin locus to activate transcription

6 July 2018

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Open chromatin encoded in DNA sequence is the signature of 'master' replication origins in human cells.

6 July 2018

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Insights from genomic profiling of transcription factors

6 July 2018

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CTCF: master weaver of the genome

6 July 2018

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Transcription factories: gene expression in unions?

6 July 2018

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Fast and accurate short read alignment with Burrows-Wheeler transform

6 July 2018

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Determination of enriched histone modifications in non-genic portions of the human genome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439894

BRG1 requirement for long-range interaction of a locus control region with a downstream promoter.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439894

E2F in vivo binding specificity: comparison of consensus versus nonconsensus binding sites

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439894

Genome-wide pattern of TCF7L2/TCF4 chromatin occupancy in colorectal cancer cells

6 July 2018

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A comprehensive ChIP-chip analysis of E2F1, E2F4, and E2F6 in normal and tumor cells reveals interchangeable roles of E2F family members

6 July 2018

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Myc dynamically and preferentially relocates to a transcription factory occupied by Igh

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439894

High-resolution profiling of histone methylations in the human genome

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439894

Dissecting molecular steps in chromatin domain activation during hematopoietic differentiation.

6 July 2018

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The role of chromatin during transcription

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439894

Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439894

The genomic landscape of histone modifications in human T cells

6 July 2018

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Control of developmental regulators by Polycomb in human embryonic stem cells

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439894

Polycomb complexes repress developmental regulators in murine embryonic stem cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439894

Unbiased location analysis of E2F1-binding sites suggests a widespread role for E2F1 in the human genome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439894

Chromatin domain activation via GATA-1 utilization of a small subset of dispersed GATA motifs within a broad chromosomal region

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439894

Transcriptional regulation and transformation by Myc proteins

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439894

Chromosome-wide mapping of estrogen receptor binding reveals long-range regulation requiring the forkhead protein FoxA1

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439894

Capturing chromosome conformation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439894

Cytogenetics of the chronic myeloid leukemia-derived cell line K562: karyotype clarification by multicolor fluorescence in situ hybridization, comparative genomic hybridization, and locus-specific fluorescence in situ hybridization

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439894

An early haematopoietic defect in mice lacking the transcription factor GATA-2

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439894

Erythroid differentiation in chimaeric mice blocked by a targeted mutation in the gene for transcription factor GATA-1

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439894

Spatial distribution of di- and tri-methyl lysine 36 of histone H3 at active genes

6 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKS501

CTCF mediates interchromosomal colocalization between Igf2/H19 and Wsb1/Nf1.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKS501

Keys to open chromatin for transcription activation: FACT and Asf1.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKS501

Promoter-2-derived Cyp19 expression in bovine granulosa cells coincides with gene-specific DNA hypo-methylation

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22675074

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKS501

1 reference

1 August 2017

1 reference

1 August 2017

1 reference