(Q34366521)

1 August 2017

title

Biochemical and genomic analysis of substrate recognition by the double-stranded RNA binding domain of yeast RNase III. (English)

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1 August 2017

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6

Juli Feigon

1 reference

1 August 2017

Anthony K Henras

1

1 reference

1 August 2017

Mui Sam

2

1 reference

1 August 2017

Shawna L Hiley

3

1 reference

1 August 2017

Haihong Wu

4

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1 August 2017

Timothy R Hughes

5

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1 August 2017

Guillaume F Chanfreau

7

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1 August 2017

language of work or name

English

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publication date

29 June 2005

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1 August 2017

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1 August 2017

volume

11

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1 August 2017

issue

8

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1 August 2017

page(s)

1225-1237

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describes a project that uses

1 August 2017

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC1370806/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

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Genome-wide prediction and analysis of yeast RNase III-dependent snoRNA processing signals

6 July 2018

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6 July 2018

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6 July 2018

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A new alpha-helical extension promotes RNA binding by the dsRBD of Rnt1p RNAse III.

6 July 2018

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Structural basis for recognition of the AGNN tetraloop RNA fold by the double-stranded RNA-binding domain of Rnt1p RNase III.

6 July 2018

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6 July 2018

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Conservation of RNase III processing pathways and specificity in hemiascomycetes

6 July 2018

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The nuclear RNase III Drosha initiates microRNA processing

6 July 2018

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6 July 2018

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The binding site of the RNA-dependent protein kinase (PKR) on EBER1 RNA from Epstein-Barr virus

6 July 2018

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A novel family of RNA tetraloop structure forms the recognition site for Saccharomyces cerevisiae RNase III.

6 July 2018

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A role for the RNase III enzyme DCR-1 in RNA interference and germ line development in Caenorhabditis elegans

6 July 2018

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6 July 2018

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Expression profiling using microarrays fabricated by an ink-jet oligonucleotide synthesizer

6 July 2018

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Role for a bidentate ribonuclease in the initiation step of RNA interference

6 July 2018

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Human RNase III is a 160-kDa protein involved in preribosomal RNA processing

6 July 2018

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Substrate recognition by a eukaryotic RNase III: the double-stranded RNA-binding domain of Rnt1p selectively binds RNA containing a 5'-AGNN-3' tetraloop

6 July 2018

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Recognition of a conserved class of RNA tetraloops by Saccharomyces cerevisiae RNase III

6 July 2018

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RNA recognition by a Staufen double-stranded RNA-binding domain

6 July 2018

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The N-terminal domain that distinguishes yeast from bacterial RNase III contains a dimerization signal required for efficient double-stranded RNA cleavage

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370806

Functions of the exosome in rRNA, snoRNA and snRNA synthesis

6 July 2018

1 reference

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Seven novel methylation guide small nucleolar RNAs are processed from a common polycistronic transcript by Rat1p and RNase III in yeast.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370806

U1 snRNA is cleaved by RNase III and processed through an Sm site-dependent pathway

6 July 2018

1 reference

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Molecular basis of double-stranded RNA-protein interactions: structure of a dsRNA-binding domain complexed with dsRNA.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370806

Yeast RNase III as a key processing enzyme in small nucleolar RNAs metabolism.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370806

Depletion of yeast RNase III blocks correct U2 3' end formation and results in polyadenylated but functional U2 snRNA.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370806

Processing of a dicistronic small nucleolar RNA precursor by the RNA endonuclease Rnt1.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370806

Alternative 3'-end processing of U5 snRNA by RNase III.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370806

RNase III cleaves eukaryotic preribosomal RNA at a U3 snoRNP-dependent site

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370806

Structure of the dsRNA binding domain of E. coli RNase III.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370806

NMR solution structure of a dsRNA binding domain from Drosophila staufen protein reveals homology to the N-terminal domain of ribosomal protein S5

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370806

Evaluation of the RNA determinants for bacterial and yeast RNase III binding and cleavage.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370806

RNAse III-mediated degradation of unspliced pre-mRNAs and lariat introns

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370806

Purification and characterization of Saccharomyces cerevisiae Rnt1p nuclease

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370806

In vivo site-directed mutagenesis using oligonucleotides

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370806

Yeast Rnt1p is required for cleavage of the pre-ribosomal RNA in the 3' ETS but not the 5' ETS.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370806

Sequence dependence of substrate recognition and cleavage by yeast RNase III

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15987808

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

RNase III-mediated silencing of a glucose-dependent repressor in yeast

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15987808

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1261/RNA.2760705

1 reference

1 August 2017

1 reference

1 August 2017

1 reference