(Q34381445)

1 August 2017

title

P-MITE: a database for plant miniature inverted-repeat transposable elements (English)

1 reference

1 August 2017

0 references

Jiongjiong Chen

1

1 reference

1 August 2017

Qun Hu

2

1 reference

1 August 2017

Yu Zhang

3

1 reference

1 August 2017

Chen Lu

4

1 reference

1 August 2017

Hanhui Kuang

5

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1 August 2017

language of work or name

English

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publication date

29 October 2013

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1 August 2017

published in

Nucleic Acids Research

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1 August 2017

volume

42

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1 August 2017

issue

Database issue

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1 August 2017

page(s)

D1176-81

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Creative Commons Attribution-NonCommercial 3.0 Unported

1 August 2017

copyright license

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

MITE Digger, an efficient and accurate algorithm for genome wide discovery of miniature inverted repeat transposable elements

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The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution

6 July 2018

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Comparison of class 2 transposable elements at superfamily resolution reveals conserved and distinct features in cereal grass genomes

6 July 2018

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6 July 2018

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Miniature inverted-repeat transposable elements (MITEs) in rice were originated and amplified predominantly after the divergence of Oryza and Brachypodium and contributed considerable diversity to the species

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

The banana (Musa acuminata) genome and the evolution of monocotyledonous plants

6 July 2018

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Insights into salt tolerance from the genome of Thellungiella salsuginea

6 July 2018

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The genome of flax ( Linum usitatissimum ) assembled de novo from short shotgun sequence reads

6 July 2018

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6 July 2018

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The tomato genome sequence provides insights into fleshy fruit evolution

6 July 2018

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The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

The Cassava Genome: Current Progress, Future Directions

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

Characterization of active miniature inverted-repeat transposable elements in the peanut genome

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

Marker utility of miniature inverted-repeat transposable elements for wheat biodiversity and evolution.

6 July 2018

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Miniature inverted-repeat transposable elements (MITEs) have been accumulated through amplification bursts and play important roles in gene expression and species diversity in Oryza sativa

6 July 2018

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The Medicago genome provides insight into the evolution of rhizobial symbioses

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

The draft genome and transcriptome of Cannabis sativa

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

The genome of the mesopolyploid crop species Brassica rapa

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

The genome of the extremophile crucifer Thellungiella parvula

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

Genome sequence and analysis of the tuber crop potato

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

De novo genome sequencing and comparative genomics of date palm (Phoenix dactylifera)

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

The Selaginella genome identifies genetic changes associated with the evolution of vascular plants

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

The Arabidopsis lyrata genome sequence and the basis of rapid genome size change

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

The genome of woodland strawberry (Fragaria vesca)

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

The genome of Theobroma cacao

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

Sequence analysis of the genome of an oil-bearing tree, Jatropha curcas L

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

MITE-Hunter: a program for discovering miniature inverted-repeat transposable elements from genomic sequences

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

The Chlorella variabilis NC64A genome reveals adaptation to photosymbiosis, coevolution with viruses, and cryptic sex

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

The genome of the domesticated apple (Malus × domestica Borkh.)

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

Draft genome sequence of the oilseed species Ricinus communis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

Genome sequencing and analysis of the model grass Brachypodium distachyon

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

Genome sequence of the palaeopolyploid soybean

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

The B73 Maize Genome: Complexity, Diversity, and Dynamics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

The genome of the cucumber, Cucumis sativus L

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

Epigenetic silencing of transposable elements: a trade-off between reduced transposition and deleterious effects on neighboring gene expression

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

MUST: a system for identification of miniature inverted-repeat transposable elements and applications to Anabaena variabilis and Haloquadratum walsbyi

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

The Sorghum bicolor genome and the diversification of grasses

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

Identification of miniature inverted-repeat transposable elements (MITEs) and biogenesis of their siRNAs in the Solanaceae: new functional implications for MITEs

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

Genome structure of the legume, Lotus japonicus

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus).

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

The Physcomitrella Genome Reveals Evolutionary Insights into the Conquest of Land by Plants

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

A unified classification system for eukaryotic transposable elements

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

The Chlamydomonas genome reveals the evolution of key animal and plant functions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

The map-based sequence of the rice genome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

Repbase Update, a database of eukaryotic repetitive elements

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

The TIGR Plant Repeat Databases: a collective resource for the identification of repetitive sequences in plants

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

Genome-wide analysis of mariner-like transposable elements in rice reveals complex relationships with stowaway miniature inverted repeat transposable elements (MITEs)

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

Genome-wide analysis of the Emigrant family of MITEs of Arabidopsis thaliana.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

Micron, a microsatellite-targeting transposable element in the rice genome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

Eight novel families of miniature inverted repeat transposable elements in the African malaria mosquito, Anopheles gambiae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

The MITE family heartbreaker (Hbr): molecular markers in maize

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

Three novel families of miniature inverted-repeat transposable elements are associated with genes of the yellow fever mosquito, Aedes aegypti

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

Molecular basis of mutations at the waxy locus of maize: correlation with the fine structure genetic map.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

Tourist: a large family of small inverted repeat elements frequently associated with maize genes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3964958

Evidence that a family of miniature inverted-repeat transposable elements (MITEs) from the Arabidopsis thaliana genome has arisen from a pogo-like DNA transposon

6 July 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKT1000

A two-edged role for the transposable element Kiddo in the rice ubiquitin2 promoter

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKT1000

A universal classification of eukaryotic transposable elements implemented in Repbase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKT1000

The draft genome of watermelon (Citrullus lanatus) and resequencing of 20 diverse accessions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKT1000

Genome sequence of foxtail millet (Setaria italica) provides insights into grass evolution and biofuel potential

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKT1000

21 January 2018

Identifiers

DOI

10.1093/NAR/GKT1000

1 reference

1 August 2017

DBLP publication ID

journals/nar/ChenHZLK14

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

1 August 2017

1 reference