(Q34392132)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24341913%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

title

Fungal evolutionary genomics provides insight into the mechanisms of adaptive divergence in eukaryotes (English)

1 reference

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3 March 2020

0 references

2

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3 March 2020

Tatiana Giraud

9

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3 March 2020

Pierre Gladieux

1

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3 March 2020

Helene Badouin

3

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3 March 2020

Damien de Vienne

6

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Ricardo C Rodríguez de la Vega

3 March 2020

7

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3 March 2020

author name string

Antoine Branca

4

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3 March 2020

Gabriela Aguileta

5

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3 March 2020

Sara Branco

8

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3 March 2020

publication date

22 January 2014

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3 March 2020

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3 March 2020

volume

23

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3 March 2020

issue

4

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3 March 2020

page(s)

753-773

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Rapidly evolving genes in pathogens: methods for detecting positive selection and examples among fungi, bacteria, viruses and protists

3 March 2020

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Extensive, nonrandom diversity of excision footprints generated by Ds-like transposon Ascot-1 suggests new parallels with V(D)J recombination

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A high-throughput gene knockout procedure for Neurospora reveals functions for multiple transcription factors

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21 January 2018

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The composition of phyllosphere fungal assemblages of European beech (Fagus sylvatica) varies significantly along an elevation gradient

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The genetic landscape of a cell

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The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization

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Evidence for domesticated and wild populations of Saccharomyces cerevisiae

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Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus

21 January 2018

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Systematic changes in gene expression patterns following adaptive evolution in yeast

21 January 2018

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Gene expression divergence in yeast is coupled to evolution of DNA-encoded nucleosome organization

21 January 2018

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The penicillin gene cluster is amplified in tandem repeats linked by conserved hexanucleotide sequences

21 January 2018

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Emerging fungal threats to animal, plant and ecosystem health

21 January 2018

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The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes

21 January 2018

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Evidence for widespread adaptive evolution of gene expression in budding yeast

21 January 2018

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Polygenic cis-regulatory adaptation in the evolution of yeast pathogenicity.

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Ecological genetic divergence of the fungal pathogen Didymella rabiei on sympatric wild and domesticated Cicer spp. (Chickpea).

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Functional profiling of the Saccharomyces cerevisiae genome

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The evolutionary imprint of domestication on genome variation and function of the filamentous fungus Aspergillus oryzae.

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Unidirectional evolutionary transitions in fungal mating systems and the role of transposable elements

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The tempo and modes of evolution of reproductive isolation in fungi

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Linking the emergence of fungal plant diseases with ecological speciation

21 January 2018

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Evolution of the population structure of Venturia inaequalis, the apple scab fungus, associated with the domestication of its host.

21 January 2018

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Emergence of novel fungal pathogens by ecological speciation: importance of the reduced viability of immigrants

21 January 2018

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Purifying selection after episodes of recurrent adaptive diversification in fungal pathogens

21 January 2018

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The genetics of hyphal fusion and vegetative incompatibility in filamentous ascomycete fungi

21 January 2018

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Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis

21 January 2018

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Are species real? The shape of the species boundary with exponential failure, reinforcement, and the "missing snowball".

21 January 2018

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Lost in the middle of nowhere: the AvrLm1 avirulence gene of the Dothideomycete Leptosphaeria maculans.

21 January 2018

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A screen for recessive speciation genes expressed in the gametes of F1 hybrid yeast

21 January 2018

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The repertoire and dynamics of evolutionary adaptations to controlled nutrient-limited environments in yeast

21 January 2018

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21 January 2018

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The plant immune system

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Population genomics of domestic and wild yeasts

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Multiple infections by the anther smut pathogen are frequent and involve related strains

21 January 2018

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Competition, cooperation among kin, and virulence in multiple infections

21 January 2018

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A relationship between carotenoid accumulation and the distribution of species of the fungus Neurospora in Spain

21 January 2018

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Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium

21 January 2018

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Genome sequencing and analysis of Aspergillus oryzae

21 January 2018

1 reference

Comparative genomics of a plant-pathogenic fungus, Pyrenophora tritici-repentis, reveals transduplication and the impact of repeat elements on pathogenicity and population divergence

21 January 2018

1 reference

Acquisition of prokaryotic genes by fungal genomes

21 January 2018

1 reference

Phylogenomics of the oxidative phosphorylation in fungi reveals extensive gene duplication followed by functional divergence

21 January 2018

1 reference

The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis

21 January 2018

1 reference

Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78

21 January 2018

1 reference

The Penicillium chrysogenum antifungal protein PAF, a promising tool for the development of new antifungal therapies and fungal cell biology studies.

21 January 2018

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21 January 2018

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Genetic structure and local adaptation of European wheat yellow rust populations: the role of temperature-specific adaptation

21 January 2018

1 reference

How can we achieve durable disease resistance in agricultural ecosystems?

21 January 2018

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Genomes of obligate plant pathogens reveal adaptations for obligate parasitism

21 January 2018

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Physical linkage of metabolic genes in fungi is an adaptation against the accumulation of toxic intermediate compounds

21 January 2018

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Frequent adaptation and the McDonald-Kreitman test.

21 January 2018

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Integrative approaches for finding modular structure in biological networks

21 January 2018

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Expanding the paradigms of plant pathogen life history and evolution of parasitic fitness beyond agricultural boundaries

21 January 2018

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Molecular genetic study of introgression between Saccharomyces bayanus and S. cerevisiae.

21 January 2018

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Chromosomal Speciation and Molecular Divergence--Accelerated Evolution in Rearranged Chromosomes

21 January 2018

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Population genomic sequencing of Coccidioides fungi reveals recent hybridization and transposon control

21 January 2018

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Sexual selection in mushroom-forming basidiomycetes.

21 January 2018

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Eukaryote-to-eukaryote gene transfer events revealed by the genome sequence of the wine yeast Saccharomyces cerevisiae EC1118.

21 January 2018

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Diverse lifestyles and strategies of plant pathogenesis encoded in the genomes of eighteen Dothideomycetes fungi

21 January 2018

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Genomic tillage and the harvest of fungal phytopathogens

21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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Using phylogenetic profiles to predict functional relationships.

21 January 2018

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Molecular characterization of a chromosomal rearrangement involved in the adaptive evolution of yeast strains.

21 January 2018

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Altered patterns of gene duplication and differential gene gain and loss in fungal pathogens

21 January 2018

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The molecular evolutionary basis of species formation

21 January 2018

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The genomic organization of plant pathogenicity in Fusarium species.

21 January 2018

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Nuclear and genome dynamics in multinucleate ascomycete fungi

21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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Correlation of mycelial growth rate with other phenotypic characters in evolved genotypes of Aspergillus nidulans.

21 January 2018

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The properties of adaptive walks in evolving populations of fungus

21 January 2018

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Magic traits in speciation: 'magic' but not rare?

21 January 2018

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Fitness distribution and transgressive segregation across 40 environments in a hybrid progeny population of the human-pathogenic yeast Cryptococcus neoformans

21 January 2018

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Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives

21 January 2018

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Host-jump drives rapid and recent ecological speciation of the emergent fungal pathogenColletotrichum kahawae

21 January 2018

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Horizontal transfer of a nitrate assimilation gene cluster and ecological transitions in fungi: a phylogenetic study

21 January 2018

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Multiple GAL pathway gene clusters evolved independently and by different mechanisms in fungi

21 January 2018

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Horizontal Transfer of a Large and Highly Toxic Secondary Metabolic Gene Cluster between Fungi

21 January 2018

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The genomics of obligate (and nonobligate) biotrophs

21 January 2018

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Genomics of biotrophy in fungi and oomycetes--emerging patterns

21 January 2018

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Genome Expansion and Gene Loss in Powdery Mildew Fungi Reveal Tradeoffs in Extreme Parasitism

21 January 2018

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21 January 2018

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Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus)

21 January 2018

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Virulence and competitiveness: testing the relationship during inter- and intraspecific mixed infections

21 January 2018

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21 January 2018

Fungal effector proteins

1 reference

Allelic variation in the effector genes of the tomato pathogen Cladosporium fulvum reveals different modes of adaptive evolution

21 January 2018

1 reference

In silico characterization and molecular evolutionary analysis of a novel superfamily of fungal effector proteins.

21 January 2018

1 reference

Evolution, selection and isolation: a genomic view of speciation in fungal plant pathogens

21 January 2018

1 reference

The origins of plant pathogens in agro-ecosystems

21 January 2018

1 reference

Population genetics of fungal and oomycete effectors involved in gene-for-gene interactions

21 January 2018

1 reference

Origin and domestication of the fungal wheat pathogen Mycosphaerella graminicola via sympatric speciation

21 January 2018

1 reference

The making of a new pathogen: insights from comparative population genomics of the domesticated wheat pathogen Mycosphaerella graminicola and its wild sister species

21 January 2018

1 reference

Large-scale introgression shapes the evolution of the mating-type chromosomes of the filamentous ascomycete Neurospora tetrasperma.

21 January 2018

1 reference

Multiple interkingdom horizontal gene transfers in Pyrenophora and closely related species and their contributions to phytopathogenic lifestyles.

21 January 2018

1 reference

Towards population genomics of effector-effector target interactions

21 January 2018

1 reference

Genome architecture is a selectable trait that can be maintained by antagonistic pleiotropy

21 January 2018

1 reference

Fungal regulatory evolution: cis and trans in the balance

21 January 2018

1 reference

The evolution of combinatorial gene regulation in fungi

21 January 2018

1 reference

Genetic architecture of a reinforced, postmating, reproductive isolation barrier between Neurospora species indicates evolution via natural selection

21 January 2018

1 reference

Global transcriptome profile of Cryptococcus neoformans during exposure to hydrogen peroxide induced oxidative stress

21 January 2018

1 reference

Evolution of linked avirulence effectors in Leptosphaeria maculans is affected by genomic environment and exposure to resistance genes in host plants

21 January 2018

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Efficient prediction of co-complexed proteins based on coevolution

21 January 2018

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Cospeciation vs host-shift speciation: methods for testing, evidence from natural associations and relation to coevolution

21 January 2018

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Horizontal gene transfer and the evolution of secondary metabolite gene clusters in fungi: an hypothesis

21 January 2018

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Ancestral polymorphism and adaptive evolution in the trichothecene mycotoxin gene cluster of phytopathogenic Fusarium

21 January 2018

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The wheat powdery mildew genome shows the unique evolution of an obligate biotroph

21 January 2018

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Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis

21 January 2018

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Evolutionary genomics: yeasts accelerate beyond BLAST.

21 January 2018

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The genetic structure of the plant pathogenic fungus Melampsora larici-populina on its wild host is extensively impacted by host domestication

21 January 2018

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Dandruff-associated Malassezia genomes reveal convergent and divergent virulence traits shared with plant and human fungal pathogens

21 January 2018

1 reference

Rapid speciation following recent host shifts in the plant pathogenic fungus Rhynchosporium.

21 January 2018

1 reference

Endophytic life strategies decoded by genome and transcriptome analyses of the mutualistic root symbiont Piriformospora indica

21 January 2018

1 reference

Peroxide accumulation and cell death in filamentous fungi induced by contact with a contestant

21 January 2018

1 reference

The Red Queen Beats the Jack-Of-All-Trades: The Limitations on the Evolution of Phenotypic Plasticity and Niche Breadth

21 January 2018

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Microevolution of Cryptococcus neoformans Driven by Massive Tandem Gene Amplification

21 January 2018

1 reference

The power and promise of population genomics: from genotyping to genome typing

21 January 2018

1 reference