(Q34442480)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25319264%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

title

DNA supercoiling: a regulatory signal for the λ repressor (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25319264%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25319264%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

author name string

Yue Ding

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25319264%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

Geraldine Fulcrand

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25319264%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

Fenfei Leng

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25319264%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

David Dunlap

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25319264%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

Laura Finzi

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25319264%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

language of work or name

English

0 references

publication date

15 October 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25319264%20AND%20SRC:MED&resulttype=core&format=json

Proceedings of the National Academy of Sciences of the United States of America

21 February 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25319264%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

volume

111

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25319264%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

issue

43

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25319264%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

page(s)

15402-15407

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25319264%20AND%20SRC:MED&resulttype=core&format=json

Transposable prophage Mu is organized as a stable chromosomal domain of E. coli.

21 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

DNA supercoiling enhances cooperativity and efficiency of an epigenetic switch

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

Transcription-factor-mediated DNA looping probed by high-resolution, single-molecule imaging in live E. coli cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

Purification of bacteriophage lambda repressor

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

Transcription under torsion

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

The hierarchy of the 3D genome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

Transcription forms and remodels supercoiling domains unfolding large-scale chromatin structures

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

The effect of nonspecific binding of lambda repressor on DNA looping dynamics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

NAP1-assisted nucleosome assembly on DNA measured in real time by single-molecule magnetic tweezers

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

Rates of gyrase supercoiling and transcription elongation control supercoil density in a bacterial chromosome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

Gene order and chromosome dynamics coordinate spatiotemporal gene expression during the bacterial growth cycle

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

Dividing a supercoiled DNA molecule into two independent topological domains

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

Torsional Mechanics of DNA Are Regulated by Small-Molecule Intercalation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

Torsional sensing of small-molecule binding using magnetic tweezers

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

Energetics at the DNA supercoiling transition

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

Direct demonstration and quantification of long-range DNA looping by the lambda bacteriophage repressor.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

DNA supercoiling-dependent gene regulation in Chlamydia

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

Superhelical destabilization in regulatory regions of stress response genes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

Fast dynamics of supercoiled DNA revealed by single-molecule experiments

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

Torsional rigidities of weakly strained DNAs.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

DNA looping: the consequences and its control.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

Topological domain structure of the Escherichia coli chromosome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

Cooperativity in long-range gene regulation by the lambda CI repressor.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

Supercoiling and denaturation in Gal repressor/heat unstable nucleoid protein (HU)-mediated DNA looping

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

Structural transitions and elasticity from torque measurements on DNA.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

Making contacts on a nucleic acid polymer

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

rexB of bacteriophage lambda is an anti-cell death gene

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

Surveying a supercoil domain by using the gamma delta resolution system in Salmonella typhimurium

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

The elasticity of a single supercoiled DNA molecule

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

Recombination by resolvase is inhibited by lac repressor simultaneously binding operators between res sites

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

Periodicity of DNA folding in higher order chromatin structures

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217475

Magnetic torque tweezers: measuring torsional stiffness in DNA and RecA-DNA filaments.

6 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1320644111

Torque and dynamics of linking number relaxation in stretched supercoiled DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1320644111

Backtracking determines the force sensitivity of RNAP II in a factor-dependent manner

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1320644111

Coupling DNA supercoiling to transcription in defined protein systems.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1320644111

Flagellar and global gene regulation in Helicobacter pylori modulated by changes in DNA supercoiling

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1320644111

Single-molecule DNA nanomanipulation: improved resolution through use of shorter DNA fragments.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1320644111

Dynamics of DNA Supercoils

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1320644111

Micro-mechanical measurement of the torsional modulus of DNA

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25319264

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Single-cell Analysis of λ Immunity Regulation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25319264

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Anharmonic Torsional Stiffness of DNA Revealed under Small External Torques

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25319264

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1320644111

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25319264%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25319264%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

PubMed publication ID

25319264

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25319264%20AND%20SRC:MED&resulttype=core&format=json