(Q34471541)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25164881%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

title

Regulation of glucose-dependent gene expression by the RNA helicase Dbp2 in Saccharomyces cerevisiae (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25164881%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

main subject

Saccharomyces cerevisiae

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25164881%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

Christopher J Petell

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25164881%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

Elizabeth J. Tran

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25164881%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

author name string

Sara C Cloutier

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25164881%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

Matthew J Schipma

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25164881%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

Wai Kit Ma

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25164881%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

language of work or name

English

0 references

publication date

27 August 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25164881%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

number of pages

14

1 reference

inferred from page(s)

published in

Genetics

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25164881%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

volume

198

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25164881%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

issue

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25164881%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

page(s)

1001-1014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25164881%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

14 March 2020

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4224148/fullTextXML

inferred from PubMed Central ID database lookup

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6 July 2018

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Bimodal expression of PHO84 is modulated by early termination of antisense transcription.

6 July 2018

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The DEAD-box protein Dbp2 functions with the RNA-binding protein Yra1 to promote mRNP assembly

6 July 2018

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6 July 2018

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6 July 2018

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Regulations of sugar transporters: insights from yeast

6 July 2018

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DEAD-box helicases as integrators of RNA, nucleotide and protein binding

6 July 2018

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Global analysis of yeast mRNPs

6 July 2018

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AMP-activated protein kinase: a target for drugs both ancient and modern

6 July 2018

1 reference

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Long non-coding antisense RNA controls Uchl1 translation through an embedded SINEB2 repeat.

6 July 2018

1 reference

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Nutritional control of growth and development in yeast

6 July 2018

1 reference

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Metabolic activation of the HOG MAP kinase pathway by Snf1/AMPK regulates lipid signaling at the Golgi

6 July 2018

1 reference

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The DEAD-box RNA helicase Dbp2 connects RNA quality control with repression of aberrant transcription

6 July 2018

1 reference

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Decapping of long noncoding RNAs regulates inducible genes.

6 July 2018

1 reference

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Dynamic profiling of mRNA turnover reveals gene-specific and system-wide regulation of mRNA decay

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

RNA helicases p68 and p72: multifunctional proteins with important implications for cancer development

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

Dynamic analysis of cytosolic glucose and ATP levels in yeast using optical sensors.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

Behavior of a metabolic cycling population at the single cell level as visualized by fluorescent gene expression reporters

6 July 2018

1 reference

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RNA helicases at work: binding and rearranging

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

Prp43 bound at different sites on the pre-rRNA performs distinct functions in ribosome synthesis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

Growth-limiting intracellular metabolites in yeast growing under diverse nutrient limitations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

Growth control and ribosome biogenesis.

6 July 2018

1 reference

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6 July 2018

1 reference

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H3 lysine 4 di- and tri-methylation deposited by cryptic transcription attenuates promoter activation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

Bidirectional promoters generate pervasive transcription in yeast

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

The RNA helicase p68 is a novel androgen receptor coactivator involved in splicing and is overexpressed in prostate cancer

6 July 2018

1 reference

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Galactose metabolism in yeast-structure and regulation of the leloir pathway enzymes and the genes encoding them

6 July 2018

1 reference

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P68 RNA helicase (DDX5) alters activity of cis- and trans-acting factors of the alternative splicing of H-Ras

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

DEAD-box proteins unwind duplexes by local strand separation

6 July 2018

1 reference

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Kinetic redistribution of native and misfolded RNAs by a DEAD-box chaperone

6 July 2018

1 reference

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Antisense artifacts in transcriptome microarray experiments are resolved by actinomycin D.

6 July 2018

1 reference

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P68 RNA helicase unwinds the human let-7 microRNA precursor duplex and is required for let-7-directed silencing of gene expression

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

Redundant role of DEAD box proteins p68 (Ddx5) and p72/p82 (Ddx17) in ribosome biogenesis and cell proliferation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

The RNA helicases p68/p72 and the noncoding RNA SRA are coregulators of MyoD and skeletal muscle differentiation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

When transcriptome meets metabolome: fast cellular responses of yeast to sudden relief of glucose limitation.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

Yeast Gal4: a transcriptional paradigm revisited

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

The Drosophila P68 RNA helicase regulates transcriptional deactivation by promoting RNA release from chromatin

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

Discriminatory RNP remodeling by the DEAD-box protein DED1.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

TOR signaling in growth and metabolism

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

ATP- and ADP-dependent modulation of RNA unwinding and strand annealing activities by the DEAD-box protein DED1.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

Dark matter in the genome: evidence of widespread transcription detected by microarray tiling experiments

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

A dynamic transcriptional network communicates growth potential to ribosome synthesis and critical cell size

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

The p68 and p72 DEAD box RNA helicases interact with HDAC1 and repress transcription in a promoter-specific manner

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

Absence of Dbp2p alters both nonsense-mediated mRNA decay and rRNA processing

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

A new mathematical model for relative quantification in real-time RT-PCR

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

The economics of ribosome biosynthesis in yeast

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

Regulation of ribosome biogenesis by the rapamycin-sensitive TOR-signaling pathway in Saccharomyces cerevisiae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

Yeast carbon catabolite repression

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

Identifying the right stop: determining how the surveillance complex recognizes and degrades an aberrant mRNA.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

Regulated nuclear translocation of the Mig1 glucose repressor

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

Yeast SNF1 is functionally related to mammalian AMP-activated protein kinase and regulates acetyl-CoA carboxylase in vivo.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

Autoregulation of expression of the yeast Dbp2p ‘DEAD-box’ protein is mediated by sequences in the conserved DBP2 intron

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

Transcriptional regulation in the yeast GAL gene family: a complex genetic network

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

SUMO-2/3 conjugates accumulating under heat shock or MG132 treatment result largely from new protein synthesis.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

XUTs are a class of Xrn1-sensitive antisense regulatory non-coding RNA in yeast.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

Unwinding by local strand separation is critical for the function of DEAD-box proteins as RNA chaperones

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

A ncRNA modulates histone modification and mRNA induction in the yeast GAL gene cluster

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

Glucose as a hormone: receptor-mediated glucose sensing in the yeast Saccharomyces cerevisiae

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

When the stress of your environment makes you go HOG wild

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

HXT5 expression is determined by growth rates in Saccharomyces cerevisiae

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4224148

The nuclear exportin Msn5 is required for nuclear export of the Mig1 glucose repressor of Saccharomyces cerevisiae

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25164881

12 December 2020

inferred from PubMed ID database lookup

Glucose repression/derepression in budding yeast: SNF1 protein kinase is activated by phosphorylation under derepressing conditions, and this correlates with a high AMP:ATP ratio

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25164881

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1534/GENETICS.114.170019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25164881%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25164881%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

PubMed publication ID

25164881

1 reference