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ZIFA: Dimensionality reduction for zero-inflated single-cell gene expression analysis
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scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
4630968
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26527291%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
title
ZIFA: Dimensionality reduction for zero-inflated single-cell gene expression analysis
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
4630968
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26527291%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
main subject
RNA sequencing
0 references
dimensionality reduction
1 reference
based on heuristic
inferred from title
author
Christopher Yau
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
4630968
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26527291%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
author name string
Emma Pierson
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
4630968
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26527291%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
publication date
2 November 2015
1 reference
stated in
Europe PubMed Central
PMC publication ID
4630968
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26527291%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
published in
Genome Biology
1 reference
stated in
Europe PubMed Central
PMC publication ID
4630968
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26527291%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
volume
16
1 reference
stated in
Europe PubMed Central
PMC publication ID
4630968
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26527291%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
page(s)
241
1 reference
stated in
Europe PubMed Central
PMC publication ID
4630968
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26527291%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
copyright license
Creative Commons Attribution 4.0 International
start time
2 November 2015
1 reference
stated in
April 2022 Public Data File from Crossref
copyright status
copyrighted
0 references
cites work
Spatial reconstruction of single-cell gene expression data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4630968
retrieved
7 July 2018
Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4630968
retrieved
7 July 2018
Unbiased classification of sensory neuron types by large-scale single-cell RNA sequencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4630968
retrieved
7 July 2018
Low-coverage single-cell mRNA sequencing reveals cellular heterogeneity and activated signaling pathways in developing cerebral cortex
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4630968
retrieved
7 July 2018
Single-cell RNA-seq highlights intratumoral heterogeneity in primary glioblastoma
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4630968
retrieved
7 July 2018
Single-cell RNA-seq reveals dynamic paracrine control of cellular variation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4630968
retrieved
7 July 2018
Bayesian approach to single-cell differential expression analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4630968
retrieved
7 July 2018
Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4630968
retrieved
7 July 2018
The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4630968
retrieved
7 July 2018
Dissecting genomic diversity, one cell at a time
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4630968
retrieved
7 July 2018
Quantitative single-cell RNA-seq with unique molecular identifiers
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4630968
retrieved
7 July 2018
Single-cell sequencing-based technologies will revolutionize whole-organism science
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4630968
retrieved
7 July 2018
Probabilistic Principal Component Analysis
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1186%2FS13059-015-0805-Z
retrieved
21 January 2018
A global geometric framework for nonlinear dimensionality reduction
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1186%2FS13059-015-0805-Z
retrieved
21 January 2018
Multidimensional scaling by optimizing goodness of fit to a nonmetric hypothesis
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1186%2FS13059-015-0805-Z
retrieved
21 January 2018
Identifiers
DOI
10.1186/S13059-015-0805-Z
1 reference
stated in
Europe PubMed Central
PMC publication ID
4630968
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26527291%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
PMC publication ID
4630968
1 reference
stated in
Europe PubMed Central
PMC publication ID
4630968
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26527291%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
PubMed publication ID
26527291
1 reference
stated in
Europe PubMed Central
PMC publication ID
4630968
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26527291%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
ResearchGate publication ID
283481470
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