(Q34505002)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26663721%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

title

Enhancer Turnover Is Associated with a Divergent Transcriptional Response to Glucocorticoid in Mouse and Human Macrophages (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26663721%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26663721%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

Robert S Young

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26663721%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

David A Hume

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26663721%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

author name string

Alasdair W Jubb

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26663721%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

language of work or name

English

0 references

publication date

9 December 2015

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26663721%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

published in

Journal of Immunology

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26663721%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

volume

196

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26663721%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

issue

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26663721%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

page(s)

813-822

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26663721%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

2 March 2020

limma

1 reference

22 June 2022

https://europepmc.org/article/PMC/4707550

inferred from PubMed Central ID database lookup

cites work

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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Glucocorticoid receptor coordinates transcription factor-dominated regulatory network in macrophages.

7 July 2018

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7 July 2018

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Innate immune activity conditions the effect of regulatory variants upon monocyte gene expression

7 July 2018

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7 July 2018

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7 July 2018

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Cooperativity and rapid evolution of cobound transcription factors in closely related mammals

7 July 2018

1 reference

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Genomic responses in mouse models poorly mimic human inflammatory diseases

7 July 2018

1 reference

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How glucocorticoid receptors modulate the activity of other transcription factors: a scope beyond tethering.

7 July 2018

1 reference

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The structural basis of direct glucocorticoid-mediated transrepression

7 July 2018

1 reference

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7 July 2018

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Insights into negative regulation by the glucocorticoid receptor from genome-wide profiling of inflammatory cistromes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

It takes two to tango: dimerisation of glucocorticoid receptor and its anti-inflammatory functions.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Conservation and divergence in Toll-like receptor 4-regulated gene expression in primary human versus mouse macrophages

7 July 2018

1 reference

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Pig bone marrow-derived macrophages resemble human macrophages in their response to bacterial lipopolysaccharide

7 July 2018

1 reference

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Fast gapped-read alignment with Bowtie 2

7 July 2018

1 reference

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Cis-regulatory elements: molecular mechanisms and evolutionary processes underlying divergence

7 July 2018

1 reference

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Sequence shortening in the rodent ancestor

7 July 2018

1 reference

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Animal transcription networks as highly connected, quantitative continua

7 July 2018

1 reference

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Widespread negative response elements mediate direct repression by agonist-liganded glucocorticoid receptor

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Functional and mechanistic diversity of distal transcription enhancers

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Chromatin accessibility pre-determines glucocorticoid receptor binding patterns.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Identifying a high fraction of the human genome to be under selective constraint using GERP++.

7 July 2018

1 reference

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When needles look like hay: how to find tissue-specific enhancers in model organism genomes

7 July 2018

1 reference

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Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities

7 July 2018

1 reference

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Glucocorticoids promote survival of anti-inflammatory macrophages via stimulation of adenosine receptor A3.

7 July 2018

1 reference

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Five-vertebrate ChIP-seq reveals the evolutionary dynamics of transcription factor binding

7 July 2018

1 reference

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Binding site turnover produces pervasive quantitative changes in transcription factor binding between closely related Drosophila species

7 July 2018

1 reference

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7 July 2018

1 reference

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Comparison of gene expression profiles between human and mouse monocyte subsets

7 July 2018

1 reference

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Glucocorticoid regulation of mouse and human dual specificity phosphatase 1 (DUSP1) genes: unusual cis-acting elements and unexpected evolutionary divergence

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Genomic determination of the glucocorticoid response reveals unexpected mechanisms of gene regulation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Network visualization and analysis of gene expression data using BioLayout Express(3D).

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Developmental roles of 21 Drosophila transcription factors are determined by quantitative differences in binding to an overlapping set of thousands of genomic regions

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Potential etiologic and functional implications of genome-wide association loci for human diseases and traits

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

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7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

The functional repertoires of metazoan genomes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Glucocorticoids induce an activated, anti-inflammatory monocyte subset in mice that resembles myeloid-derived suppressor cells

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Conservation analysis predicts in vivo occupancy of glucocorticoid receptor-binding sequences at glucocorticoid-induced genes.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Interaction of the glucocorticoid receptor with the chromatin landscape

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

The HSA domain of BRG1 mediates critical interactions required for glucocorticoid receptor-dependent transcriptional activation in vivo

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Tissue-specific transcriptional regulation has diverged significantly between human and mouse

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Enhancer identification through comparative genomics

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

In vivo enhancer analysis of human conserved non-coding sequences

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

A distal enhancer and an ultraconserved exon are derived from a novel retroposon

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Parallel patterns of evolution in the genomes and transcriptomes of humans and chimpanzees

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Of mice and not men: differences between mouse and human immunology

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

affy--analysis of Affymetrix GeneChip data at the probe level

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Comparing genomic expression patterns across species identifies shared transcriptional profile in aging

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Genetic control of the innate immune response

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Alternate surfaces of transcriptional coregulator GRIP1 function in different glucocorticoid receptor activation and repression contexts

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Initial sequencing and comparative analysis of the mouse genome

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Regulation of urokinase-type plasminogen activator gene transcription by macrophage colony-stimulating factor.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Evolution at two levels in humans and chimpanzees

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Latent enhancers activated by stimulation in differentiated cells

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Prevalence of long-term oral glucocorticoid prescriptions in the UK over the past 20 years

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Transposable elements have rewired the core regulatory network of human embryonic stem cells

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Identification and characterization of enhancers controlling the inflammatory gene expression program in macrophages.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Colony-stimulating factor-1 (CSF-1) delivers a proatherogenic signal to human macrophages

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Glucocorticoids induce differentiation of a specifically activated, anti-inflammatory subtype of human monocytes.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

Gene profiling reveals unknown enhancing and suppressive actions of glucocorticoids on immune cells

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4707550

The correlation between plasminogen activator activity and thymidine incorporation in mouse bone marrow-derived macrophages

9 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26663721

12 December 2020

inferred from PubMed ID database lookup

Preparation and characterization of human bone marrow-derived macrophages

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26663721

12 December 2020

inferred from PubMed ID database lookup

Chronic Exposure to Glucocorticoids Shapes Gene Expression and Modulates Innate and Adaptive Activation Pathways in Macrophages with Distinct Changes in Leukocyte Attraction

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26663721

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.4049/JIMMUNOL.1502009

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26663721%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26663721%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

1 reference