(Q34524734)

2 August 2017

title

Structural transitions of confined model proteins: molecular dynamics simulation and experimental validation (English)

1 reference

2 August 2017

Jianzhong Wu

3

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author name string

Diannan Lu

series ordinal

1

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2 August 2017

Zheng Liu

series ordinal

2

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2 August 2017

language of work or name

English

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publication date

3 February 2006

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2 August 2017

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2 August 2017

volume

90

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2 August 2017

issue

9

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2 August 2017

page(s)

3224-3238

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Molecular crowding enhances native state stability and refolding rates of globular proteins

2 August 2017

cites work

1 reference

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The competition between protein folding and aggregation: off-lattice minimalist model studies.

7 July 2018

1 reference

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Chaperonin function--effects of crowding and confinement.

7 July 2018

1 reference

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Accelerated folding in the weak hydrophobic environment of a chaperonin cavity: creation of an alternate fast folding pathway

7 July 2018

1 reference

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Loops, linkages, rings, catenanes, cages, and crowders: entropy-based strategies for stabilizing proteins.

7 July 2018

1 reference

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Assembly and kinetic folding pathways of a tetrameric beta-sheet complex: molecular dynamics simulations on simplified off-lattice protein models

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

Protein Folding: Importance of the Anfinsen Cage

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

Caging helps proteins fold

7 July 2018

1 reference

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How protein thermodynamics and folding mechanisms are altered by the chaperonin cage: molecular simulations

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

Simulations of beta-hairpin folding confined to spherical pores using distributed computing

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

Review: model peptides and the physicochemical approach to beta-amyloids

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

Mechanisms and kinetics of beta-hairpin formation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

Acceleration of oligomerization, not fibrillization, is a shared property of both alpha-synuclein mutations linked to early-onset Parkinson's disease: implications for pathogenesis and therapy

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

Amyloid diseases: abnormal protein aggregation in neurodegeneration

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

Folding funnels and frustration in off-lattice minimalist protein landscapes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

The alternative conformations of amyloidogenic proteins and their multi-step assembly pathways

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

Molecular chaperones, folding catalysts, and the recovery of active recombinant proteins from E. coli. To fold or to refold

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

Protein folding in vivo and renaturation of recombinant proteins from inclusion bodies

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

Principles of chaperone-assisted protein folding: differences between in vitro and in vivo mechanisms

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

Residues in chaperonin GroEL required for polypeptide binding and release

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

The crystal structure of the bacterial chaperonin GroEL at 2.8 A

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

Location of a folding protein and shape changes in GroEL-GroES complexes imaged by cryo-electron microscopy.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

Principles that govern the folding of protein chains

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

X-ray diffraction from intraneuronal paired helical filaments and extraneuronal amyloid fibers in Alzheimer disease indicates cross-beta conformation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

Metastability of the folded states of globular proteins

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

Protein folding in the cell

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

Thermodynamics and stability of a beta-sheet complex: molecular dynamics simulations on simplified off-lattice protein models

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

Effects of confinement in chaperonin assisted protein folding: rate enhancement by decreasing the roughness of the folding energy landscape

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

Conformation of GroEL-bound alpha-lactalbumin probed by mass spectrometry.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

The reaction cycle of GroEL and GroES in chaperonin-assisted protein folding.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1432124

Protein folding and binding in confined spaces and in crowded solutions

27 October 2018

1 reference

12 December 2020

Artificial chaperone-assisted refolding of carbonic anhydrase B

1 reference

12 December 2020

Factors governing the foldability of proteins

1 reference

12 December 2020

Protein folding kinetics: timescales, pathways and energy landscapes in terms of sequence-dependent properties

1 reference

12 December 2020

Criterion that determines the foldability of proteins

1 reference

12 December 2020

Exploring the kinetic requirements for enhancement of protein folding rates in the GroEL cavity

1 reference

12 December 2020

Dual Function of Protein Confinement in Chaperonin-Assisted Protein Folding

1 reference

12 December 2020

Artificial chaperone-assisted refolding of denatured-reduced lysozyme: modulation of the competition between renaturation and aggregation

1 reference

12 December 2020

10.1529/BIOPHYSJ.105.071761

Identifiers

DOI

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2 August 2017

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2 August 2017

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