(Q34535938)

2 August 2017

Tempo and mode of genome evolution in a 50,000-generation experiment (English)

1 reference

2 August 2017

10

Claudine Médigue

0 references

Richard Lenski

object named as

Richard E Lenski

12

0 references

Sébastien Wielgoss

object named as

Sébastien Wielgoss

8

0 references

Olivier Tenaillon

1

object named as

Olivier Tenaillon

1 reference

2 August 2017

2

Jeffrey E Barrick

1 reference

2 August 2017

Noah Ribeck

3

1 reference

2 August 2017

Daniel E Deatherage

4

1 reference

2 August 2017

Jeffrey L Blanchard

5

1 reference

2 August 2017

Aurko Dasgupta

6

1 reference

2 August 2017

Gabriel C Wu

7

1 reference

2 August 2017

Stéphane Cruveiller

9

1 reference

2 August 2017

Dominique Schneider

11

1 reference

2 August 2017

language of work or name

English

0 references

publication date

1 August 2016

1 reference

2 August 2017

1 reference

2 August 2017

536

1 reference

2 August 2017

7615

1 reference

2 August 2017

165-170

1 reference

https://scigraph.springernature.com/pub.10.1038/nature18959

2 August 2017

0 references

cites work

Adaptation to Parasites and Costs of Parasite Resistance in Mutator and Nonmutator Bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Synonymous Genetic Variation in Natural Isolates of Escherichia coli Does Not Predict Where Synonymous Substitutions Occur in a Long-Term Experiment

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Adaptation, Clonal Interference, and Frequency-Dependent Interactions in a Long-Term Evolution Experiment with Escherichia coli

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Quantitative evolutionary dynamics using high-resolution lineage tracking

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Identifying structural variation in haploid microbial genomes from short-read resequencing data using breseq

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Transfer of noncoding DNA drives regulatory rewiring in bacteria

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Large chromosomal rearrangements during a long-term evolution experiment with Escherichia coli

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Deleterious Passengers in Adapting Populations

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Identification of mutations in laboratory-evolved microbes from next-generation sequencing data using breseq

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

The genetic basis of Escherichia coli pathoadaptation to macrophages.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Whole genome, whole population sequencing reveals that loss of signaling networks is the major adaptive strategy in a constant environment

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Genome dynamics during experimental evolution

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

The dynamics of genetic draft in rapidly adapting populations

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Pervasive genetic hitchhiking and clonal interference in forty evolving yeast populations

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Mutation rate dynamics in a bacterial population reflect tension between adaptation and genetic load

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Genomic analysis of a key innovation in an experimental Escherichia coli population

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Comparative population genomics of maize domestication and improvement

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Mutation Rate Inferred From Synonymous Substitutions in a Long-Term Evolution Experiment With Escherichia coli

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Parallel bacterial evolution within multiple patients identifies candidate pathogenicity genes.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Genetic draft and quasi-neutrality in large facultatively sexual populations

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Synonymous but not the same: the causes and consequences of codon bias

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Did genetic drift drive increases in genome complexity?

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Genome-wide analysis of a long-term evolution experiment with Drosophila

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Forces that influence the evolution of codon bias

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Genome-wide SNP and haplotype analyses reveal a rich history underlying dog domestication

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Antagonistic coevolution accelerates molecular evolution

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Genome evolution and adaptation in a long-term experiment with Escherichia coli

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Tracing ancestors and relatives of Escherichia coli B, and the derivation of B strains REL606 and BL21(DE3).

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Evo-Devo and an Expanding Evolutionary Synthesis: A Genetic Theory of Morphological Evolution

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Historical contingency and the evolution of a key innovation in an experimental population of Escherichia coli

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Recombination speeds adaptation by reducing competition between beneficial mutations in populations of Escherichia coli

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

PAML 4: phylogenetic analysis by maximum likelihood

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Mutations of Bacteria from Virus Sensitivity to Virus Resistance

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Tests of parallel molecular evolution in a long-term experiment with Escherichia coli

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Natural selection on protein-coding genes in the human genome

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Genetic signatures of strong recent positive selection at the lactase gene

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Bayesian analysis suggests that most amino acid replacements in Drosophila are driven by positive selection

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Versatile and open software for comparing large genomes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

APE: Analyses of Phylogenetics and Evolution in R language

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

The origins of genome complexity

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Fast and accurate phylogeny reconstruction algorithms based on the minimum-evolution principle

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Mechanisms causing rapid and parallel losses of ribose catabolism in evolving populations of Escherichia coli B.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Second-order selection in bacterial evolution: selection acting on mutation and recombination rates in the course of adaptation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Perspective: Evolutionary developmental biology and the problem of variation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Genetic drift in an infinite population. The pseudohitchhiking model

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Long-Term Experimental Evolution in Escherichia coli. VIII. Dynamics of a Balanced Polymorphism

7 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

7 July 2018

https://api.crossref.org/works/10.1038%2FNATURE18959

Different trajectories of parallel evolution during viral adaptation

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Evolution of high mutation rates in experimental populations of E. coli

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

Estimate of the genomic mutation rate deleterious to overall fitness in E. coli.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4988878

The molecular diversity of adaptive convergence.

7 July 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE18959

Negative epistasis between beneficial mutations in an evolving bacterial population

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE18959

Long-Term Experimental Evolution in Escherichia coli. I. Adaptation and Divergence During 2,000 Generations

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE18959

Long-term dynamics of adaptation in asexual populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE18959

Epistasis and allele specificity in the emergence of a stable polymorphism in Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE18959

The fate of competing beneficial mutations in an asexual population.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE18959

The rate of adaptive evolution in enteric bacteria.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE18959

Constraints on adaptation of Escherichia coli to mixed-resource environments increase over time.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE18959

Genome sequences of Escherichia coli B strains REL606 and BL21(DE3).

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE18959

Transposable elements as mutator genes in evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE18959

21 January 2018

Identifiers

DOI

10.1038/NATURE18959

1 reference

2 August 2017

1 reference

2 August 2017

1 reference