(Q34558812)

3 August 2017

Complete genome sequence of Acidaminococcus fermentans type strain (VR4). (English)

1 reference

3 August 2017

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whole genome sequencing

1 reference

1 reference

20

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3 August 2017

24

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3 August 2017

29

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3 August 2017

31

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3 August 2017

34

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3 August 2017

4

Alla Lapidus

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Hans-Peter Klenk

35

Hans-Peter Klenk

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Tijana Glavina Del Rio

7

Tijana Glavina Del Rio

0 references

Philip Hugenholtz

33

Philip Hugenholtz

0 references

Sam Pitluck

16

Sam Pitluck

1 reference

3 August 2017

32

Victor Markowitz

1 reference

3 August 2017

19

Amrita Pati

1 reference

3 August 2017

11

Jan-Fang Cheng

1 reference

3 August 2017

12

Cliff Han

1 reference

3 August 2017

Konstantinos Mavromatis

21

Konstantinos Mavromatis

1 reference

3 August 2017

15

Lynne Goodwin

1 reference

3 August 2017

2

Rüdiger Pukall

1 reference

3 August 2017

17

Natalia Mikhailova

1 reference

3 August 2017

23

Krishna Palaniappan

1 reference

3 August 2017

25

Loren Hauser

1 reference

3 August 2017

6

Matt Nolan

1 reference

3 August 2017

22

Amy Chen

1 reference

3 August 2017

8

Susan Lucas

1 reference

3 August 2017

26

Cynthia D Jeffries

1 reference

3 August 2017

10

Hope Tice

1 reference

3 August 2017

13

John C Detter

1 reference

3 August 2017

5

Alex Copeland

1 reference

3 August 2017

28

Manfred Rohde

1 reference

3 August 2017

14

David Bruce

1 reference

3 August 2017

1

Yun-Juan Chang

1 reference

3 August 2017

18

Konstantinos Liolios

1 reference

3 August 2017

30

James Bristow

1 reference

3 August 2017

Elizabeth Saunders

3

1 reference

3 August 2017

Feng Chen

9

1 reference

3 August 2017

Thomas Brettin

27

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3 August 2017

29 July 2010

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Standards in genomic sciences

3 August 2017

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3 August 2017

3

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3 August 2017

1

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3 August 2017

1-14

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https://scigraph.springernature.com/pub.10.4056/sigs.1002553

3 August 2017

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cites work

Complete genome sequence of Veillonella parvula type strain (Te3)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

Complete genome sequence of Anaerococcus prevotii type strain (PC1).

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

Complete genome sequence of Kytococcus sedentarius type strain (541).

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

En route to a genome-based classification of Archaea and Bacteria?

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

Prodigal: prokaryotic gene recognition and translation initiation site identification

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

Negativicoccus succinicivorans gen. nov., sp. nov. etc.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

IMG ER: a system for microbial genome annotation expert review and curation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

Potential core species and satellite species in the bacterial community within the rabbit caecum

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

A rapid bootstrap algorithm for the RAxML Web servers

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

The minimum information about a genome sequence (MIGS) specification

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

Acidaminococcus intestini sp. nov., isolated from human clinical samples

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

Effect of bowel preparation and colonoscopy on post-procedure intestinal microbiota composition

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

Dual Mechanisms of Tricarboxylate Transport and Catabolism by Acidaminococcus fermentans.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

Multiple sequence alignment using partial order graphs

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

Horizontal gene transfer in prokaryotes: quantification and classification

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

Sodium ion-translocating decarboxylases

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

Crystal structure of the Acidaminococcus fermentans 2-hydroxyglutaryl-CoA dehydratase component A

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

ACI-1 from Acidaminococcus fermentans: characterization of the first beta-lactamase in Anaerobic cocci

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

Gene ontology: tool for the unification of biology

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

The sodium ion translocating glutaconyl-CoA decarboxylase from Acidaminococcus fermentans: cloning and function of the genes forming a second operon

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

Emendation of the Description of Acidaminococcus fermentans, a trans-Aconitate- and Citrate-Oxidizing Bacterium

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

Activation of (R)-2-hydroxyglutaryl-CoA dehydratase from Acidaminococcus fermentans.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

Glutaconate CoA-transferase from Acidaminococcus fermentans

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

Acidaminococcus gen. n., Acidaminococcus fermentans sp. n., anaerobic gram-negative diplococci using amino acids as the sole energy source for growth

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

How many bootstrap replicates are necessary?

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

Phylogenetic identity, growth-response time and rRNA operon copy number of soil bacteria indicate different stages of community succession.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

Adenosine triphosphate-induced electron transfer in 2-hydroxyglutaryl-CoA dehydratase from Acidaminococcus fermentans

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

Location of the two genes encoding glutaconate coenzyme A-transferase at the beginning of the hydroxyglutarate operon in Acidaminococcus fermentans.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035267

The iron-sulfur clusters in 2-hydroxyglutaryl-CoA dehydratase from Acidaminococcus fermentans. Biochemical and spectroscopic investigations

27 October 2018

1 reference

12 December 2020

Some Morphological and Physiological Characteristics of Gram Negative Anaerobic Bacteria isolated from the Alimentary Tract of the Pig

1 reference

12 December 2020

Phylogenetic and chemotaxonomic characterization of Acidaminococcus fermentans

1 reference

12 December 2020

Fermentation of trans-aconitate via citrate, oxaloacetate, and pyruvate by Acidaminococcus fermentans

1 reference

12 December 2020

Sodium ion-dependent hydrogen production in Acidaminococcus fermentans

1 reference

12 December 2020

Identifiers

DOI

10.4056/SIGS.1002553

1 reference

Dimensions Publication ID

3 August 2017

0 references

1 reference

3 August 2017

1 reference