(Q34569215)

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WGS Analysis and Interpretation in Clinical and Public Health Microbiology Laboratories: What Are the Requirements and How Do Existing Tools Compare?

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scholarly article

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25437808%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

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Europe PubMed Central

WGS Analysis and Interpretation in Clinical and Public Health Microbiology Laboratories: What Are the Requirements and How Do Existing Tools Compare? (English)

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Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25437808%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

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23 February 2020

3

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25437808%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

6

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25437808%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

author name string

Thomas C Conway

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25437808%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

Carlos Queiroz

4

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25437808%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

Matthias Reumann

5

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23 February 2020

Laura I Rusu

7

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Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25437808%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

publication date

11 June 2014

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25437808%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

number of pages

22

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23 February 2020

3

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Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25437808%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

2

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25437808%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

437-458

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Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25437808%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

copyright license

Creative Commons Attribution 4.0 International

11 June 2014

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1 reference

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snp-search: simple processing, manipulation and searching of SNPs from high-throughput sequencing

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snpTree--a web-server to identify and construct SNP trees from whole genome sequence data

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Phylogeographic variation in recombination rates within a global clone of methicillin-resistant Staphylococcus aureus

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Structure of the type IV secretion system in different strains of Anaplasma phagocytophilum

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7 July 2018

Rapid whole-genome sequencing for investigation of a suspected tuberculosis outbreak

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A novel human-infection-derived bacterium provides insights into the evolutionary origins of mutualistic insect-bacterial symbioses

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Whole-genome sequencing for analysis of an outbreak of meticillin-resistant Staphylococcus aureus: a descriptive study.

1 reference

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7 July 2018

Whole-genome sequencing to delineate Mycobacterium tuberculosis outbreaks: a retrospective observational study

1 reference

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7 July 2018

The multidrug-resistant PMEN1 pneumococcus is a paradigm for genetic success

1 reference

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Integrating genome-based informatics to modernize global disease monitoring, information sharing, and response

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7 July 2018

NG6: Integrated next generation sequencing storage and processing environment

1 reference

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7 July 2018

Tracking a hospital outbreak of carbapenem-resistant Klebsiella pneumoniae with whole-genome sequencing

1 reference

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7 July 2018

Routine use of microbial whole genome sequencing in diagnostic and public health microbiology

1 reference

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7 July 2018

Transforming clinical microbiology with bacterial genome sequencing.

1 reference

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Shigella sonnei genome sequencing and phylogenetic analysis indicate recent global dissemination from Europe

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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12 December 2020

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10.3390/PATHOGENS3020437

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25437808%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

PMC publication ID

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25437808%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

PubMed publication ID

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25437808%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

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